Top 10 genes with highest correlation to Rv3439c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2831/echA16 | (cc=0.5786) | info on Rv2831/echA16 |
| Rv0383c/- | (cc=0.5428) | info on Rv0383c/- |
| Rv1727/- | (cc=0.5389) | info on Rv1727/- |
| Rv1736c/narX | (cc=0.5366) | info on Rv1736c/narX |
| Rv1974/- | (cc=0.5308) | info on Rv1974/- |
| Rv2601/speE | (cc=0.5304) | info on Rv2601/speE |
| Rv0139/- | (cc=0.5296) | info on Rv0139/- |
| Rv1494/mazE4 | (cc=0.5242) | info on Rv1494/mazE4 |
| Rv2917/- | (cc=0.5219) | info on Rv2917/- |
| Rv0449c/- | (cc=0.5137) | info on Rv0449c/- |
Correlation of Rv3439c/- with Rv0449c/-
Normalized LFCs for Rv3439c/-:
(description and provenance of datasets)
| Rv3439c/- | Rv0449c/- | |
| Fe_supp_jason_reseq | -0.661 | -0.355 |
| low_pH_jason_reseq | -1.138 | 0.243 |
| NO_jason_reseq | -0.41 | 0.092 |
| B6_jason_reseq | 0.863 | -0.243 |
| MHCII_jason_reseq | 0.712 | 0.286 |
| Isoniazid02 | 0.49 | 0.01 |
| Rifampicin4 | 0.501 | 0.2 |
| Ethambutol3 | 0.216 | 0.106 |
| Meropenem3 | 0.944 | 0.882 |
| Vancomycin16 | 0.329 | 0.037 |
| Rv2680_day32 | -0.131 | 0.392 |
| H37Rv_KO_MarP | 0.008 | 0.268 |
| hypoxia_3wks | 0.064 | -0.14 |
| hypoxia_6wks | 0.416 | -0.478 |
| glycerol | 0.831 | 0.031 |
| cholesterol | -0.004 | -0.441 |
| AJ | 0.35 | -0.313 |
| Bibs02 | -0.852 | -0.493 |
| Bibs02c | 0.596 | -0.017 |
| BL6 | -0.167 | -0.355 |
| BL6a | -0.258 | -0.319 |
| BXD01 | -0.84 | -1.063 |
| BXD010 | -0.482 | -0.828 |
| BXD011 | -0.788 | -0.3 |
| BXD03 | -0.476 | -0.686 |
| BXD04 | -1.466 | -0.524 |
| BXD05 | -0.633 | -0.532 |
| BXD06 | -0.519 | -0.711 |
| BXD07 | -0.991 | -1.096 |
| BXD08 | -0.382 | -0.602 |
| BXD09 | -0.506 | -1.195 |
| CAST | -0.22 | -0.36 |
| CCcont | -0.209 | -1.146 |
| DS01 | 0.573 | 0.115 |
| DS02 | 0.443 | 0.098 |
| DS04 | -0.131 | 0.03 |
| DS0c | 0.234 | 0.214 |
| GP01 | 0.022 | 0.582 |
| GP02 | -0.036 | 0.674 |
| GP0c | -0.339 | 0.11 |
| NOD | -0.739 | -0.096 |
| NZO | 0.533 | 0.559 |
| PWK | 0.507 | 0.016 |
| H37Rv_KO_CtpC | -1.21 | -0.486 |
| H37Rv_KO_CtpD | 0.156 | -0.48 |
| H37Rv_KO_Rv1272 | -0.388 | -0.172 |
| H37Rv_KO_SugABC | -1.238 | -0.497 |
| H37Rv_KO_MbtN | -1.602 | 0.194 |
| Trans05 | -0.711 | -0.078 |
| macrophage_unactivated | -0.366 | -0.022 |
| IL1 | -0.184 | 0.136 |
| Rapamycin | 0.301 | -0.166 |
| Tcell | -0.831 | -0.906 |
| GMCSF | 0.584 | 0.238 |
| IFNab | -0.284 | 0.139 |
| IFNg | 0.04 | 0.468 |
| IFNg_GMCSF1 | -0.452 | -0.085 |
| Rv1432_day32 | 0.057 | -0.291 |
| Rv1565c_day32 | 0.464 | 0.199 |
| secA2_input | 0.299 | 1.011 |
| delta_Rv3594 | 1.716 | 0.33 |
| delta_Rv3717 | 1.287 | 0.579 |
| delta_Rv3811 | 1.184 | 0.278 |
| delta_Rv0954 | 2.106 | 0.587 |
| PonA1 | 1.384 | 0.748 |
| EccD1_KO | -0.141 | -0.076 |
| EspI_KO | -0.106 | 0.396 |
| PE35_KO | -0.403 | 0.184 |
| PPE68_KO | -0.765 | -0.112 |
| glycerol2 | 0.394 | 0.0 |
| lignocerate | 0.43 | -0.431 |
| oleate | -0.37 | 0.347 |
| phosphatidylcholine | 0.09 | -0.296 |
| acetate | -1.037 | -0.474 |
| glucAc | -0.233 | -0.823 |
| Rv0950ko | -0.112 | 0.624 |
| Rv1096ko | 0.365 | 0.374 |
| Rv3684ko | 0.039 | 0.678 |
| delta_otsA_trehalose | 0.507 | 0.048 |