Top 10 genes with highest correlation to Rv3416/whiB3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3880c/espL | (cc=0.5429) | info on Rv3880c/espL |
| Rv3883c/mycP1 | (cc=0.5338) | info on Rv3883c/mycP1 |
| Rv3616c/espA | (cc=0.5223) | info on Rv3616c/espA |
| Rv1789/PPE26 | (cc=0.5207) | info on Rv1789/PPE26 |
| Rv3534c/hsaF | (cc=0.5152) | info on Rv3534c/hsaF |
| Rv3871/eccCb1 | (cc=0.5119) | info on Rv3871/eccCb1 |
| Rv3869/eccB1 | (cc=0.498) | info on Rv3869/eccB1 |
| Rv0256c/PPE2 | (cc=0.4973) | info on Rv0256c/PPE2 |
| Rv3615c/espC | (cc=0.4956) | info on Rv3615c/espC |
| Rv2604c/snoP | (cc=0.4942) | info on Rv2604c/snoP |
Correlation of Rv3416/whiB3 with Rv3534c/hsaF
Normalized LFCs for Rv3416/whiB3:
(description and provenance of datasets)
| Rv3416/whiB3 | Rv3534c/hsaF | |
| Fe_supp_jason_reseq | -0.661 | 0.076 |
| low_pH_jason_reseq | 1.527 | 1.079 |
| NO_jason_reseq | -0.583 | 0.326 |
| B6_jason_reseq | -3.965 | -1.249 |
| MHCII_jason_reseq | -2.38 | -1.495 |
| Isoniazid02 | 0.16 | -0.31 |
| Rifampicin4 | 0.937 | 0.233 |
| Ethambutol3 | 0.0 | -0.013 |
| Meropenem3 | -0.315 | -0.095 |
| Vancomycin16 | 0.764 | -0.058 |
| Rv2680_day32 | 1.799 | -0.735 |
| H37Rv_KO_MarP | 0.58 | 0.903 |
| hypoxia_3wks | 0.331 | -0.758 |
| hypoxia_6wks | 0.643 | -1.011 |
| glycerol | 0.118 | 0.268 |
| cholesterol | -1.272 | -1.797 |
| AJ | -1.109 | -2.457 |
| Bibs02 | -1.311 | -1.423 |
| Bibs02c | -0.743 | -1.576 |
| BL6 | -1.92 | -1.006 |
| BL6a | -1.739 | -1.99 |
| BXD01 | -1.238 | -1.968 |
| BXD010 | -2.244 | -0.611 |
| BXD011 | -1.309 | -1.761 |
| BXD03 | -2.889 | -2.75 |
| BXD04 | -1.676 | -2.152 |
| BXD05 | -1.113 | -1.688 |
| BXD06 | -1.483 | -2.323 |
| BXD07 | -1.569 | -1.736 |
| BXD08 | -1.731 | -1.295 |
| BXD09 | -1.829 | -1.781 |
| CAST | -2.661 | -1.997 |
| CCcont | -0.902 | -0.193 |
| DS01 | -1.1 | -1.983 |
| DS02 | -1.659 | 0.153 |
| DS04 | -1.095 | -1.366 |
| DS0c | -2.41 | -1.164 |
| GP01 | -1.582 | -1.953 |
| GP02 | -1.73 | -2.671 |
| GP0c | 0.225 | -1.482 |
| NOD | -2.309 | -2.379 |
| NZO | 0.516 | -1.984 |
| PWK | -1.377 | -1.971 |
| H37Rv_KO_CtpC | -1.165 | -2.245 |
| H37Rv_KO_CtpD | -1.717 | -2.688 |
| H37Rv_KO_Rv1272 | 0.781 | -0.907 |
| H37Rv_KO_SugABC | -0.572 | -0.252 |
| H37Rv_KO_MbtN | -0.064 | 0.446 |
| Trans05 | -0.02 | -1.259 |
| macrophage_unactivated | -0.294 | -0.262 |
| IL1 | -1.474 | 0.647 |
| Rapamycin | -2.081 | 0.786 |
| Tcell | -0.199 | 0.606 |
| GMCSF | 0.156 | -0.261 |
| IFNab | -1.636 | -0.596 |
| IFNg | 0.663 | 0.118 |
| IFNg_GMCSF1 | -0.192 | -0.094 |
| Rv1432_day32 | 0.771 | -1.07 |
| Rv1565c_day32 | -0.847 | -1.845 |
| secA2_input | -0.398 | -0.402 |
| delta_Rv3594 | 0.909 | -1.329 |
| delta_Rv3717 | 1.258 | -0.181 |
| delta_Rv3811 | -0.162 | -0.717 |
| delta_Rv0954 | -0.293 | 0.105 |
| PonA1 | -0.226 | -0.35 |
| EccD1_KO | 0.079 | 0.579 |
| EspI_KO | 0.896 | -0.93 |
| PE35_KO | 0.16 | -0.134 |
| PPE68_KO | 0.026 | -0.221 |
| glycerol2 | 1.283 | 1.026 |
| lignocerate | 0.024 | 1.346 |
| oleate | 0.659 | -0.119 |
| phosphatidylcholine | -0.307 | 0.675 |
| acetate | 0.673 | 1.119 |
| glucAc | -0.782 | 1.019 |
| Rv0950ko | -0.437 | 0.305 |
| Rv1096ko | -1.607 | 0.57 |
| Rv3684ko | -0.707 | 0.547 |
| delta_otsA_trehalose | 2.964 | 0.977 |