Top 10 genes with highest correlation to Rv3416/whiB3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3880c/espL | (cc=0.5429) | info on Rv3880c/espL |
| Rv3883c/mycP1 | (cc=0.5338) | info on Rv3883c/mycP1 |
| Rv3616c/espA | (cc=0.5223) | info on Rv3616c/espA |
| Rv1789/PPE26 | (cc=0.5207) | info on Rv1789/PPE26 |
| Rv3534c/hsaF | (cc=0.5152) | info on Rv3534c/hsaF |
| Rv3871/eccCb1 | (cc=0.5119) | info on Rv3871/eccCb1 |
| Rv3869/eccB1 | (cc=0.498) | info on Rv3869/eccB1 |
| Rv0256c/PPE2 | (cc=0.4973) | info on Rv0256c/PPE2 |
| Rv3615c/espC | (cc=0.4956) | info on Rv3615c/espC |
| Rv2604c/snoP | (cc=0.4942) | info on Rv2604c/snoP |
Correlation of Rv3416/whiB3 with Rv2604c/snoP
Normalized LFCs for Rv3416/whiB3:
(description and provenance of datasets)
| Rv3416/whiB3 | Rv2604c/snoP | |
| Fe_supp_jason_reseq | -0.661 | -1.279 |
| low_pH_jason_reseq | 1.527 | 0.94 |
| NO_jason_reseq | -0.583 | -0.244 |
| B6_jason_reseq | -3.965 | -4.081 |
| MHCII_jason_reseq | -2.38 | -3.594 |
| Isoniazid02 | 0.16 | 0.998 |
| Rifampicin4 | 0.937 | 0.509 |
| Ethambutol3 | 0.0 | -0.263 |
| Meropenem3 | -0.315 | -0.092 |
| Vancomycin16 | 0.764 | 0.806 |
| Rv2680_day32 | 1.799 | 0.0 |
| H37Rv_KO_MarP | 0.58 | -0.61 |
| hypoxia_3wks | 0.331 | 0.566 |
| hypoxia_6wks | 0.643 | -0.741 |
| glycerol | 0.118 | -4.362 |
| cholesterol | -1.272 | -3.129 |
| AJ | -1.109 | -5.012 |
| Bibs02 | -1.311 | -3.95 |
| Bibs02c | -0.743 | -4.52 |
| BL6 | -1.92 | -2.702 |
| BL6a | -1.739 | -4.081 |
| BXD01 | -1.238 | -2.262 |
| BXD010 | -2.244 | -1.711 |
| BXD011 | -1.309 | -2.752 |
| BXD03 | -2.889 | -2.921 |
| BXD04 | -1.676 | -2.548 |
| BXD05 | -1.113 | -2.773 |
| BXD06 | -1.483 | -2.75 |
| BXD07 | -1.569 | -2.727 |
| BXD08 | -1.731 | -2.873 |
| BXD09 | -1.829 | -2.65 |
| CAST | -2.661 | -4.343 |
| CCcont | -0.902 | -0.211 |
| DS01 | -1.1 | -5.102 |
| DS02 | -1.659 | -4.698 |
| DS04 | -1.095 | -3.238 |
| DS0c | -2.41 | -4.686 |
| GP01 | -1.582 | -2.133 |
| GP02 | -1.73 | -1.797 |
| GP0c | 0.225 | -2.01 |
| NOD | -2.309 | -4.852 |
| NZO | 0.516 | -4.309 |
| PWK | -1.377 | -3.406 |
| H37Rv_KO_CtpC | -1.165 | -3.2 |
| H37Rv_KO_CtpD | -1.717 | -1.421 |
| H37Rv_KO_Rv1272 | 0.781 | -3.046 |
| H37Rv_KO_SugABC | -0.572 | 0.415 |
| H37Rv_KO_MbtN | -0.064 | -2.03 |
| Trans05 | -0.02 | -2.823 |
| macrophage_unactivated | -0.294 | -0.114 |
| IL1 | -1.474 | 0.071 |
| Rapamycin | -2.081 | 0.107 |
| Tcell | -0.199 | 0.411 |
| GMCSF | 0.156 | 0.359 |
| IFNab | -1.636 | 0.574 |
| IFNg | 0.663 | -0.51 |
| IFNg_GMCSF1 | -0.192 | -0.352 |
| Rv1432_day32 | 0.771 | 0.0 |
| Rv1565c_day32 | -0.847 | 0.0 |
| secA2_input | -0.398 | 0.65 |
| delta_Rv3594 | 0.909 | -0.263 |
| delta_Rv3717 | 1.258 | -0.104 |
| delta_Rv3811 | -0.162 | 0.763 |
| delta_Rv0954 | -0.293 | -2.605 |
| PonA1 | -0.226 | -1.332 |
| EccD1_KO | 0.079 | 1.519 |
| EspI_KO | 0.896 | 2.236 |
| PE35_KO | 0.16 | 1.683 |
| PPE68_KO | 0.026 | 1.014 |
| glycerol2 | 1.283 | -2.418 |
| lignocerate | 0.024 | -2.102 |
| oleate | 0.659 | -3.199 |
| phosphatidylcholine | -0.307 | -1.385 |
| acetate | 0.673 | -2.002 |
| glucAc | -0.782 | -1.538 |
| Rv0950ko | -0.437 | 0.513 |
| Rv1096ko | -1.607 | 1.855 |
| Rv3684ko | -0.707 | 0.684 |
| delta_otsA_trehalose | 2.964 | 0.637 |