Top 10 genes with highest correlation to Rv3416/whiB3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3880c/espL | (cc=0.5429) | info on Rv3880c/espL |
| Rv3883c/mycP1 | (cc=0.5338) | info on Rv3883c/mycP1 |
| Rv3616c/espA | (cc=0.5223) | info on Rv3616c/espA |
| Rv1789/PPE26 | (cc=0.5207) | info on Rv1789/PPE26 |
| Rv3534c/hsaF | (cc=0.5152) | info on Rv3534c/hsaF |
| Rv3871/eccCb1 | (cc=0.5119) | info on Rv3871/eccCb1 |
| Rv3869/eccB1 | (cc=0.498) | info on Rv3869/eccB1 |
| Rv0256c/PPE2 | (cc=0.4973) | info on Rv0256c/PPE2 |
| Rv3615c/espC | (cc=0.4956) | info on Rv3615c/espC |
| Rv2604c/snoP | (cc=0.4942) | info on Rv2604c/snoP |
Correlation of Rv3416/whiB3 with Rv3880c/espL
Normalized LFCs for Rv3416/whiB3:
(description and provenance of datasets)
| Rv3416/whiB3 | Rv3880c/espL | |
| Fe_supp_jason_reseq | -0.661 | -0.813 |
| low_pH_jason_reseq | 1.527 | 0.811 |
| NO_jason_reseq | -0.583 | -1.31 |
| B6_jason_reseq | -3.965 | -2.773 |
| MHCII_jason_reseq | -2.38 | -3.044 |
| Isoniazid02 | 0.16 | -0.858 |
| Rifampicin4 | 0.937 | 0.173 |
| Ethambutol3 | 0.0 | -0.204 |
| Meropenem3 | -0.315 | 0.0 |
| Vancomycin16 | 0.764 | -0.074 |
| Rv2680_day32 | 1.799 | -0.786 |
| H37Rv_KO_MarP | 0.58 | 0.868 |
| hypoxia_3wks | 0.331 | -0.53 |
| hypoxia_6wks | 0.643 | -0.833 |
| glycerol | 0.118 | -1.63 |
| cholesterol | -1.272 | -1.663 |
| AJ | -1.109 | -3.94 |
| Bibs02 | -1.311 | -1.571 |
| Bibs02c | -0.743 | -4.906 |
| BL6 | -1.92 | 0.469 |
| BL6a | -1.739 | -2.933 |
| BXD01 | -1.238 | -2.265 |
| BXD010 | -2.244 | -3.453 |
| BXD011 | -1.309 | -1.973 |
| BXD03 | -2.889 | -1.212 |
| BXD04 | -1.676 | -0.081 |
| BXD05 | -1.113 | -2.285 |
| BXD06 | -1.483 | -2.114 |
| BXD07 | -1.569 | -1.88 |
| BXD08 | -1.731 | -2.694 |
| BXD09 | -1.829 | -2.225 |
| CAST | -2.661 | -4.425 |
| CCcont | -0.902 | -0.024 |
| DS01 | -1.1 | -2.347 |
| DS02 | -1.659 | -4.659 |
| DS04 | -1.095 | -3.543 |
| DS0c | -2.41 | -4.931 |
| GP01 | -1.582 | -2.392 |
| GP02 | -1.73 | -2.085 |
| GP0c | 0.225 | -1.165 |
| NOD | -2.309 | -2.633 |
| NZO | 0.516 | -4.273 |
| PWK | -1.377 | -3.412 |
| H37Rv_KO_CtpC | -1.165 | -1.256 |
| H37Rv_KO_CtpD | -1.717 | -1.796 |
| H37Rv_KO_Rv1272 | 0.781 | -0.978 |
| H37Rv_KO_SugABC | -0.572 | -2.006 |
| H37Rv_KO_MbtN | -0.064 | 1.34 |
| Trans05 | -0.02 | -1.01 |
| macrophage_unactivated | -0.294 | -1.165 |
| IL1 | -1.474 | 0.531 |
| Rapamycin | -2.081 | -1.188 |
| Tcell | -0.199 | -1.906 |
| GMCSF | 0.156 | 0.457 |
| IFNab | -1.636 | -1.058 |
| IFNg | 0.663 | -0.682 |
| IFNg_GMCSF1 | -0.192 | -0.569 |
| Rv1432_day32 | 0.771 | 0.18 |
| Rv1565c_day32 | -0.847 | -1.869 |
| secA2_input | -0.398 | 0.186 |
| delta_Rv3594 | 0.909 | 0.958 |
| delta_Rv3717 | 1.258 | -0.22 |
| delta_Rv3811 | -0.162 | 1.685 |
| delta_Rv0954 | -0.293 | 0.154 |
| PonA1 | -0.226 | 0.428 |
| EccD1_KO | 0.079 | 0.559 |
| EspI_KO | 0.896 | -1.409 |
| PE35_KO | 0.16 | -1.038 |
| PPE68_KO | 0.026 | -0.432 |
| glycerol2 | 1.283 | -0.06 |
| lignocerate | 0.024 | 0.413 |
| oleate | 0.659 | 0.432 |
| phosphatidylcholine | -0.307 | -0.06 |
| acetate | 0.673 | 1.109 |
| glucAc | -0.782 | 0.165 |
| Rv0950ko | -0.437 | 0.959 |
| Rv1096ko | -1.607 | -0.793 |
| Rv3684ko | -0.707 | 0.134 |
| delta_otsA_trehalose | 2.964 | -0.226 |