Top 10 genes with highest correlation to Rv3405c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0249c/- | (cc=0.496) | info on Rv0249c/- |
Rv0248c/- | (cc=0.4672) | info on Rv0248c/- |
Rv0886/fprB | (cc=0.4652) | info on Rv0886/fprB |
Rv0840c/pip | (cc=0.4585) | info on Rv0840c/pip |
Rv3641c/fic | (cc=0.4573) | info on Rv3641c/fic |
Rv2613c/- | (cc=0.454) | info on Rv2613c/- |
Rv1367c/- | (cc=0.4534) | info on Rv1367c/- |
Rv0758/phoR | (cc=0.4442) | info on Rv0758/phoR |
Rv1056/- | (cc=0.4393) | info on Rv1056/- |
Rv2175c/- | (cc=0.4367) | info on Rv2175c/- |
Correlation of Rv3405c/- with Rv2613c/-
Normalized LFCs for Rv3405c/-:
(description and provenance of datasets)
Rv3405c/- | Rv2613c/- | |
Fe_supp_jason_reseq | 0.497 | 0.268 |
low_pH_jason_reseq | -0.348 | -1.884 |
NO_jason_reseq | -0.654 | -2.956 |
B6_jason_reseq | -0.699 | -1.402 |
MHCII_jason_reseq | 1.019 | -1.234 |
Isoniazid02 | -0.528 | -2.196 |
Rifampicin4 | 0.268 | 0.401 |
Ethambutol3 | 0.136 | 1.093 |
Meropenem3 | 0.403 | -0.61 |
Vancomycin16 | -0.117 | 0.0 |
Rv2680_day32 | -0.947 | -2.64 |
H37Rv_KO_MarP | 1.319 | 2.047 |
hypoxia_3wks | -0.323 | -3.102 |
hypoxia_6wks | -1.14 | -2.637 |
glycerol | -0.527 | -0.136 |
cholesterol | -0.852 | -1.687 |
AJ | -0.716 | -2.005 |
Bibs02 | -1.281 | -2.905 |
Bibs02c | 0.285 | -0.455 |
BL6 | 0.13 | -2.084 |
BL6a | -0.099 | -0.729 |
BXD01 | -0.133 | -2.527 |
BXD010 | -0.276 | -2.485 |
BXD011 | -1.236 | -1.765 |
BXD03 | 0.0 | -2.623 |
BXD04 | 0.156 | -2.399 |
BXD05 | -1.578 | -2.477 |
BXD06 | -0.434 | -2.457 |
BXD07 | -0.361 | -2.686 |
BXD08 | -0.5 | -2.58 |
BXD09 | -1.018 | -2.726 |
CAST | -0.674 | -3.337 |
CCcont | 0.0 | -0.355 |
DS01 | 0.76 | -3.273 |
DS02 | 0.718 | -3.297 |
DS04 | 0.306 | -2.572 |
DS0c | 0.866 | 0.919 |
GP01 | 0.394 | -1.915 |
GP02 | -0.71 | -1.614 |
GP0c | -0.3 | -2.522 |
NOD | -1.627 | -1.627 |
NZO | -0.52 | -3.024 |
PWK | -0.807 | -2.718 |
H37Rv_KO_CtpC | -0.424 | -1.813 |
H37Rv_KO_CtpD | -0.254 | -2.457 |
H37Rv_KO_Rv1272 | -0.125 | -2.736 |
H37Rv_KO_SugABC | 0.996 | -1.015 |
H37Rv_KO_MbtN | 0.721 | -1.803 |
Trans05 | -0.15 | -1.397 |
macrophage_unactivated | -0.117 | 0.537 |
IL1 | -0.694 | -2.011 |
Rapamycin | -0.654 | -0.592 |
Tcell | -0.762 | -0.629 |
GMCSF | -0.454 | -0.792 |
IFNab | -0.399 | -1.636 |
IFNg | -1.97 | -1.812 |
IFNg_GMCSF1 | -0.606 | -0.943 |
Rv1432_day32 | -0.188 | 0.0 |
Rv1565c_day32 | 2.303 | 2.003 |
secA2_input | 0.581 | -0.751 |
delta_Rv3594 | -0.45 | 1.059 |
delta_Rv3717 | -0.769 | -0.668 |
delta_Rv3811 | 0.207 | 0.0 |
delta_Rv0954 | -0.642 | -0.398 |
PonA1 | -1.003 | -1.592 |
EccD1_KO | 1.342 | 1.924 |
EspI_KO | 1.497 | 0.419 |
PE35_KO | 1.123 | 0.939 |
PPE68_KO | 0.448 | 1.286 |
glycerol2 | 1.092 | 1.684 |
lignocerate | 0.855 | 3.801 |
oleate | 2.718 | 0.0 |
phosphatidylcholine | 1.144 | 2.899 |
acetate | -0.073 | 4.337 |
glucAc | -0.378 | 3.342 |
Rv0950ko | -0.124 | -1.013 |
Rv1096ko | -0.253 | 0.16 |
Rv3684ko | -1.336 | 0.891 |
delta_otsA_trehalose | -1.06 | -1.204 |