Top 10 genes with highest correlation to Rv3376/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0270/fadD2 | (cc=0.4318) | info on Rv0270/fadD2 |
| Rv1347c/mbtK | (cc=0.3493) | info on Rv1347c/mbtK |
| Rv1332/- | (cc=0.344) | info on Rv1332/- |
| Rv2941/fadD28 | (cc=0.3423) | info on Rv2941/fadD28 |
| Rv1085c/- | (cc=0.3387) | info on Rv1085c/- |
| Rv0318c/- | (cc=0.3374) | info on Rv0318c/- |
| Rv1585c/- | (cc=0.3262) | info on Rv1585c/- |
| Rv2931/ppsA | (cc=0.3247) | info on Rv2931/ppsA |
| Rv1825/- | (cc=0.3228) | info on Rv1825/- |
| Rv2932/ppsB | (cc=0.3174) | info on Rv2932/ppsB |
Correlation of Rv3376/- with Rv2932/ppsB
Normalized LFCs for Rv3376/-:
(description and provenance of datasets)
| Rv3376/- | Rv2932/ppsB | |
| Fe_supp_jason_reseq | 1.579 | 1.59 |
| low_pH_jason_reseq | 1.584 | 2.362 |
| NO_jason_reseq | -0.725 | -0.609 |
| B6_jason_reseq | 1.759 | 1.74 |
| MHCII_jason_reseq | 0.359 | -2.896 |
| Isoniazid02 | 1.355 | -0.079 |
| Rifampicin4 | -0.452 | 0.977 |
| Ethambutol3 | -0.018 | 0.298 |
| Meropenem3 | -0.131 | 1.301 |
| Vancomycin16 | 0.157 | 0.446 |
| Rv2680_day32 | 0.129 | -1.872 |
| H37Rv_KO_MarP | 0.916 | 0.337 |
| hypoxia_3wks | 0.451 | 0.901 |
| hypoxia_6wks | 0.14 | -0.449 |
| glycerol | -0.686 | 3.274 |
| cholesterol | 0.185 | 2.06 |
| AJ | 1.052 | 0.745 |
| Bibs02 | 0.244 | -3.151 |
| Bibs02c | 0.859 | -3.087 |
| BL6 | 0.242 | 0.627 |
| BL6a | 0.881 | -0.839 |
| BXD01 | 0.844 | 1.825 |
| BXD010 | 0.221 | 0.236 |
| BXD011 | 0.583 | -0.053 |
| BXD03 | -0.018 | -0.215 |
| BXD04 | 0.354 | 1.392 |
| BXD05 | -0.365 | -1.087 |
| BXD06 | 0.382 | 0.29 |
| BXD07 | 0.078 | 0.158 |
| BXD08 | 0.625 | 1.37 |
| BXD09 | -0.279 | -0.202 |
| CAST | 0.37 | 2.613 |
| CCcont | 0.854 | 1.051 |
| DS01 | 0.38 | 0.325 |
| DS02 | -0.381 | 0.922 |
| DS04 | 0.302 | -0.499 |
| DS0c | -0.464 | -0.413 |
| GP01 | -1.322 | -2.119 |
| GP02 | -1.04 | -1.627 |
| GP0c | -0.711 | -2.791 |
| NOD | 1.199 | 1.91 |
| NZO | 0.407 | 2.604 |
| PWK | 1.024 | 0.176 |
| H37Rv_KO_CtpC | 0.504 | -0.755 |
| H37Rv_KO_CtpD | 0.715 | -0.304 |
| H37Rv_KO_Rv1272 | 0.25 | -1.181 |
| H37Rv_KO_SugABC | 0.88 | 1.092 |
| H37Rv_KO_MbtN | 0.878 | -0.479 |
| Trans05 | 0.21 | -0.982 |
| macrophage_unactivated | 3.191 | 3.857 |
| IL1 | -0.3 | -2.515 |
| Rapamycin | 0.982 | -2.047 |
| Tcell | 0.779 | 3.594 |
| GMCSF | 0.584 | -2.503 |
| IFNab | -0.305 | -2.016 |
| IFNg | 0.059 | -3.127 |
| IFNg_GMCSF1 | 0.977 | -1.141 |
| Rv1432_day32 | 0.679 | -0.454 |
| Rv1565c_day32 | 0.716 | -0.415 |
| secA2_input | -0.394 | -0.64 |
| delta_Rv3594 | 0.104 | -2.997 |
| delta_Rv3717 | -0.331 | -2.607 |
| delta_Rv3811 | 0.819 | -3.081 |
| delta_Rv0954 | -0.205 | -1.31 |
| PonA1 | 0.539 | -1.596 |
| EccD1_KO | 0.187 | -3.457 |
| EspI_KO | 0.163 | -2.447 |
| PE35_KO | -0.263 | 1.657 |
| PPE68_KO | 0.358 | -0.33 |
| glycerol2 | -0.562 | 0.971 |
| lignocerate | -0.226 | 0.615 |
| oleate | 2.424 | 1.16 |
| phosphatidylcholine | 0.438 | 1.076 |
| acetate | 1.044 | -0.008 |
| glucAc | 1.056 | -0.308 |
| Rv0950ko | 0.829 | -3.305 |
| Rv1096ko | -0.118 | -4.509 |
| Rv3684ko | 0.684 | -2.98 |
| delta_otsA_trehalose | 0.858 | 0.195 |