Top 10 genes with highest correlation to Rv3376/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0270/fadD2 | (cc=0.4318) | info on Rv0270/fadD2 |
| Rv1347c/mbtK | (cc=0.3493) | info on Rv1347c/mbtK |
| Rv1332/- | (cc=0.344) | info on Rv1332/- |
| Rv2941/fadD28 | (cc=0.3423) | info on Rv2941/fadD28 |
| Rv1085c/- | (cc=0.3387) | info on Rv1085c/- |
| Rv0318c/- | (cc=0.3374) | info on Rv0318c/- |
| Rv1585c/- | (cc=0.3262) | info on Rv1585c/- |
| Rv2931/ppsA | (cc=0.3247) | info on Rv2931/ppsA |
| Rv1825/- | (cc=0.3228) | info on Rv1825/- |
| Rv2932/ppsB | (cc=0.3174) | info on Rv2932/ppsB |
Correlation of Rv3376/- with Rv2931/ppsA
Normalized LFCs for Rv3376/-:
(description and provenance of datasets)
| Rv3376/- | Rv2931/ppsA | |
| Fe_supp_jason_reseq | 1.579 | 2.073 |
| low_pH_jason_reseq | 1.584 | 2.476 |
| NO_jason_reseq | -0.725 | -0.441 |
| B6_jason_reseq | 1.759 | 1.807 |
| MHCII_jason_reseq | 0.359 | -2.823 |
| Isoniazid02 | 1.355 | 0.295 |
| Rifampicin4 | -0.452 | 0.888 |
| Ethambutol3 | -0.018 | 0.116 |
| Meropenem3 | -0.131 | 0.49 |
| Vancomycin16 | 0.157 | -0.122 |
| Rv2680_day32 | 0.129 | -2.214 |
| H37Rv_KO_MarP | 0.916 | -0.559 |
| hypoxia_3wks | 0.451 | 0.985 |
| hypoxia_6wks | 0.14 | -0.171 |
| glycerol | -0.686 | 3.229 |
| cholesterol | 0.185 | 2.197 |
| AJ | 1.052 | 0.304 |
| Bibs02 | 0.244 | -3.444 |
| Bibs02c | 0.859 | -3.146 |
| BL6 | 0.242 | 0.604 |
| BL6a | 0.881 | -0.994 |
| BXD01 | 0.844 | 1.763 |
| BXD010 | 0.221 | 0.318 |
| BXD011 | 0.583 | -0.042 |
| BXD03 | -0.018 | -0.044 |
| BXD04 | 0.354 | 1.017 |
| BXD05 | -0.365 | -0.96 |
| BXD06 | 0.382 | 0.213 |
| BXD07 | 0.078 | 0.367 |
| BXD08 | 0.625 | 1.493 |
| BXD09 | -0.279 | -0.321 |
| CAST | 0.37 | 2.346 |
| CCcont | 0.854 | 1.122 |
| DS01 | 0.38 | 0.287 |
| DS02 | -0.381 | 0.833 |
| DS04 | 0.302 | 0.142 |
| DS0c | -0.464 | -0.553 |
| GP01 | -1.322 | -2.345 |
| GP02 | -1.04 | -1.976 |
| GP0c | -0.711 | -3.087 |
| NOD | 1.199 | 1.687 |
| NZO | 0.407 | 2.15 |
| PWK | 1.024 | -0.131 |
| H37Rv_KO_CtpC | 0.504 | -1.304 |
| H37Rv_KO_CtpD | 0.715 | -0.851 |
| H37Rv_KO_Rv1272 | 0.25 | -0.977 |
| H37Rv_KO_SugABC | 0.88 | 0.64 |
| H37Rv_KO_MbtN | 0.878 | -0.235 |
| Trans05 | 0.21 | -1.079 |
| macrophage_unactivated | 3.191 | 4.056 |
| IL1 | -0.3 | -2.462 |
| Rapamycin | 0.982 | -2.308 |
| Tcell | 0.779 | 4.005 |
| GMCSF | 0.584 | -2.886 |
| IFNab | -0.305 | -2.273 |
| IFNg | 0.059 | -3.782 |
| IFNg_GMCSF1 | 0.977 | -1.304 |
| Rv1432_day32 | 0.679 | 0.763 |
| Rv1565c_day32 | 0.716 | -0.199 |
| secA2_input | -0.394 | -0.639 |
| delta_Rv3594 | 0.104 | -2.489 |
| delta_Rv3717 | -0.331 | -2.245 |
| delta_Rv3811 | 0.819 | -2.211 |
| delta_Rv0954 | -0.205 | -1.053 |
| PonA1 | 0.539 | -1.29 |
| EccD1_KO | 0.187 | -3.595 |
| EspI_KO | 0.163 | -1.934 |
| PE35_KO | -0.263 | 1.96 |
| PPE68_KO | 0.358 | 0.141 |
| glycerol2 | -0.562 | 0.954 |
| lignocerate | -0.226 | 0.655 |
| oleate | 2.424 | 1.185 |
| phosphatidylcholine | 0.438 | 1.076 |
| acetate | 1.044 | -0.421 |
| glucAc | 1.056 | -0.462 |
| Rv0950ko | 0.829 | -3.757 |
| Rv1096ko | -0.118 | -5.398 |
| Rv3684ko | 0.684 | -3.449 |
| delta_otsA_trehalose | 0.858 | 0.356 |