Top 10 genes with highest correlation to Rv3376/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0270/fadD2 | (cc=0.4318) | info on Rv0270/fadD2 |
| Rv1347c/mbtK | (cc=0.3493) | info on Rv1347c/mbtK |
| Rv1332/- | (cc=0.344) | info on Rv1332/- |
| Rv2941/fadD28 | (cc=0.3423) | info on Rv2941/fadD28 |
| Rv1085c/- | (cc=0.3387) | info on Rv1085c/- |
| Rv0318c/- | (cc=0.3374) | info on Rv0318c/- |
| Rv1585c/- | (cc=0.3262) | info on Rv1585c/- |
| Rv2931/ppsA | (cc=0.3247) | info on Rv2931/ppsA |
| Rv1825/- | (cc=0.3228) | info on Rv1825/- |
| Rv2932/ppsB | (cc=0.3174) | info on Rv2932/ppsB |
Correlation of Rv3376/- with Rv1825/-
Normalized LFCs for Rv3376/-:
(description and provenance of datasets)
| Rv3376/- | Rv1825/- | |
| Fe_supp_jason_reseq | 1.579 | 1.331 |
| low_pH_jason_reseq | 1.584 | 0.882 |
| NO_jason_reseq | -0.725 | 0.11 |
| B6_jason_reseq | 1.759 | -0.201 |
| MHCII_jason_reseq | 0.359 | 1.275 |
| Isoniazid02 | 1.355 | -0.159 |
| Rifampicin4 | -0.452 | -2.139 |
| Ethambutol3 | -0.018 | -1.25 |
| Meropenem3 | -0.131 | -0.98 |
| Vancomycin16 | 0.157 | -4.117 |
| Rv2680_day32 | 0.129 | -2.124 |
| H37Rv_KO_MarP | 0.916 | 5.297 |
| hypoxia_3wks | 0.451 | -0.526 |
| hypoxia_6wks | 0.14 | -1.666 |
| glycerol | -0.686 | 0.592 |
| cholesterol | 0.185 | -0.55 |
| AJ | 1.052 | -1.175 |
| Bibs02 | 0.244 | -1.93 |
| Bibs02c | 0.859 | -0.576 |
| BL6 | 0.242 | -2.518 |
| BL6a | 0.881 | -0.854 |
| BXD01 | 0.844 | -1.168 |
| BXD010 | 0.221 | -2.64 |
| BXD011 | 0.583 | -1.081 |
| BXD03 | -0.018 | -1.008 |
| BXD04 | 0.354 | -0.098 |
| BXD05 | -0.365 | -2.097 |
| BXD06 | 0.382 | -1.689 |
| BXD07 | 0.078 | -1.515 |
| BXD08 | 0.625 | -0.491 |
| BXD09 | -0.279 | -1.95 |
| CAST | 0.37 | -2.302 |
| CCcont | 0.854 | -0.118 |
| DS01 | 0.38 | -2.989 |
| DS02 | -0.381 | -2.379 |
| DS04 | 0.302 | -3.277 |
| DS0c | -0.464 | -1.075 |
| GP01 | -1.322 | -2.036 |
| GP02 | -1.04 | -1.849 |
| GP0c | -0.711 | -0.797 |
| NOD | 1.199 | -1.738 |
| NZO | 0.407 | -1.126 |
| PWK | 1.024 | -3.53 |
| H37Rv_KO_CtpC | 0.504 | 0.066 |
| H37Rv_KO_CtpD | 0.715 | -0.808 |
| H37Rv_KO_Rv1272 | 0.25 | 0.574 |
| H37Rv_KO_SugABC | 0.88 | -0.657 |
| H37Rv_KO_MbtN | 0.878 | -0.57 |
| Trans05 | 0.21 | -0.536 |
| macrophage_unactivated | 3.191 | 0.978 |
| IL1 | -0.3 | 1.124 |
| Rapamycin | 0.982 | 0.424 |
| Tcell | 0.779 | 0.0 |
| GMCSF | 0.584 | 0.499 |
| IFNab | -0.305 | -0.762 |
| IFNg | 0.059 | -0.238 |
| IFNg_GMCSF1 | 0.977 | 0.349 |
| Rv1432_day32 | 0.679 | -1.832 |
| Rv1565c_day32 | 0.716 | 1.72 |
| secA2_input | -0.394 | -0.142 |
| delta_Rv3594 | 0.104 | 0.0 |
| delta_Rv3717 | -0.331 | -2.035 |
| delta_Rv3811 | 0.819 | -0.291 |
| delta_Rv0954 | -0.205 | -0.575 |
| PonA1 | 0.539 | -0.226 |
| EccD1_KO | 0.187 | -1.746 |
| EspI_KO | 0.163 | -0.967 |
| PE35_KO | -0.263 | 0.306 |
| PPE68_KO | 0.358 | -0.851 |
| glycerol2 | -0.562 | -1.777 |
| lignocerate | -0.226 | -1.108 |
| oleate | 2.424 | -0.56 |
| phosphatidylcholine | 0.438 | 0.396 |
| acetate | 1.044 | 0.123 |
| glucAc | 1.056 | 0.085 |
| Rv0950ko | 0.829 | 0.443 |
| Rv1096ko | -0.118 | -1.888 |
| Rv3684ko | 0.684 | -0.668 |
| delta_otsA_trehalose | 0.858 | -0.725 |