Top 10 genes with highest correlation to Rv3376/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0270/fadD2 | (cc=0.4318) | info on Rv0270/fadD2 |
| Rv1347c/mbtK | (cc=0.3493) | info on Rv1347c/mbtK |
| Rv1332/- | (cc=0.344) | info on Rv1332/- |
| Rv2941/fadD28 | (cc=0.3423) | info on Rv2941/fadD28 |
| Rv1085c/- | (cc=0.3387) | info on Rv1085c/- |
| Rv0318c/- | (cc=0.3374) | info on Rv0318c/- |
| Rv1585c/- | (cc=0.3262) | info on Rv1585c/- |
| Rv2931/ppsA | (cc=0.3247) | info on Rv2931/ppsA |
| Rv1825/- | (cc=0.3228) | info on Rv1825/- |
| Rv2932/ppsB | (cc=0.3174) | info on Rv2932/ppsB |
Correlation of Rv3376/- with Rv0270/fadD2
Normalized LFCs for Rv3376/-:
(description and provenance of datasets)
| Rv3376/- | Rv0270/fadD2 | |
| Fe_supp_jason_reseq | 1.579 | -0.101 |
| low_pH_jason_reseq | 1.584 | 3.232 |
| NO_jason_reseq | -0.725 | 2.494 |
| B6_jason_reseq | 1.759 | 2.248 |
| MHCII_jason_reseq | 0.359 | 0.04 |
| Isoniazid02 | 1.355 | 0.636 |
| Rifampicin4 | -0.452 | -1.386 |
| Ethambutol3 | -0.018 | 0.449 |
| Meropenem3 | -0.131 | 1.38 |
| Vancomycin16 | 0.157 | -1.841 |
| Rv2680_day32 | 0.129 | -0.947 |
| H37Rv_KO_MarP | 0.916 | 0.504 |
| hypoxia_3wks | 0.451 | -0.315 |
| hypoxia_6wks | 0.14 | 0.088 |
| glycerol | -0.686 | -0.537 |
| cholesterol | 0.185 | -0.447 |
| AJ | 1.052 | -1.007 |
| Bibs02 | 0.244 | -1.209 |
| Bibs02c | 0.859 | -1.206 |
| BL6 | 0.242 | -1.952 |
| BL6a | 0.881 | -1.322 |
| BXD01 | 0.844 | -0.959 |
| BXD010 | 0.221 | -0.36 |
| BXD011 | 0.583 | -0.722 |
| BXD03 | -0.018 | -0.661 |
| BXD04 | 0.354 | 0.454 |
| BXD05 | -0.365 | -1.065 |
| BXD06 | 0.382 | 1.015 |
| BXD07 | 0.078 | -1.061 |
| BXD08 | 0.625 | 0.061 |
| BXD09 | -0.279 | -1.184 |
| CAST | 0.37 | 0.073 |
| CCcont | 0.854 | -0.603 |
| DS01 | 0.38 | -1.122 |
| DS02 | -0.381 | -0.57 |
| DS04 | 0.302 | -0.669 |
| DS0c | -0.464 | -1.342 |
| GP01 | -1.322 | -1.771 |
| GP02 | -1.04 | -0.181 |
| GP0c | -0.711 | -2.397 |
| NOD | 1.199 | -0.631 |
| NZO | 0.407 | -0.228 |
| PWK | 1.024 | 1.631 |
| H37Rv_KO_CtpC | 0.504 | 0.593 |
| H37Rv_KO_CtpD | 0.715 | -0.718 |
| H37Rv_KO_Rv1272 | 0.25 | -1.653 |
| H37Rv_KO_SugABC | 0.88 | -0.592 |
| H37Rv_KO_MbtN | 0.878 | 0.186 |
| Trans05 | 0.21 | -0.682 |
| macrophage_unactivated | 3.191 | 0.729 |
| IL1 | -0.3 | -1.406 |
| Rapamycin | 0.982 | -1.139 |
| Tcell | 0.779 | 2.512 |
| GMCSF | 0.584 | -1.18 |
| IFNab | -0.305 | -1.515 |
| IFNg | 0.059 | -1.339 |
| IFNg_GMCSF1 | 0.977 | -0.314 |
| Rv1432_day32 | 0.679 | 0.868 |
| Rv1565c_day32 | 0.716 | -2.791 |
| secA2_input | -0.394 | -0.146 |
| delta_Rv3594 | 0.104 | -0.762 |
| delta_Rv3717 | -0.331 | -0.258 |
| delta_Rv3811 | 0.819 | -1.105 |
| delta_Rv0954 | -0.205 | 0.15 |
| PonA1 | 0.539 | -0.122 |
| EccD1_KO | 0.187 | -0.681 |
| EspI_KO | 0.163 | -0.314 |
| PE35_KO | -0.263 | -0.58 |
| PPE68_KO | 0.358 | -0.4 |
| glycerol2 | -0.562 | -2.532 |
| lignocerate | -0.226 | -1.584 |
| oleate | 2.424 | 4.242 |
| phosphatidylcholine | 0.438 | -2.389 |
| acetate | 1.044 | -0.364 |
| glucAc | 1.056 | -0.362 |
| Rv0950ko | 0.829 | -1.321 |
| Rv1096ko | -0.118 | -1.182 |
| Rv3684ko | 0.684 | 0.583 |
| delta_otsA_trehalose | 0.858 | -0.66 |