Top 10 genes with highest correlation to Rv3315c/cdd:
update plot | correlation | link to info on gene |
---|---|---|
Rv2583c/relA | (cc=0.5037) | info on Rv2583c/relA |
Rv1325c/PE_PGRS24 | (cc=0.5002) | info on Rv1325c/PE_PGRS24 |
Rv2388c/hemN | (cc=0.4678) | info on Rv2388c/hemN |
Rv1282c/oppC | (cc=0.4668) | info on Rv1282c/oppC |
Rv1833c/- | (cc=0.4624) | info on Rv1833c/- |
Rv2333c/stp | (cc=0.4576) | info on Rv2333c/stp |
Rv1731/gabD2 | (cc=0.4546) | info on Rv1731/gabD2 |
Rv2506/- | (cc=0.4501) | info on Rv2506/- |
Rv0532/PE_PGRS6 | (cc=0.4499) | info on Rv0532/PE_PGRS6 |
Rv1290c/- | (cc=0.4467) | info on Rv1290c/- |
Correlation of Rv3315c/cdd with Rv2583c/relA
Normalized LFCs for Rv3315c/cdd:
(description and provenance of datasets)
Rv3315c/cdd | Rv2583c/relA | |
Fe_supp_jason_reseq | 0.598 | -0.268 |
low_pH_jason_reseq | -0.811 | -2.113 |
NO_jason_reseq | 0.053 | -0.108 |
B6_jason_reseq | -1.586 | -1.759 |
MHCII_jason_reseq | -2.374 | -0.901 |
Isoniazid02 | 4.528 | 6.0 |
Rifampicin4 | 0.184 | 1.822 |
Ethambutol3 | 4.387 | 1.732 |
Meropenem3 | 0.218 | 0.284 |
Vancomycin16 | 0.215 | -2.122 |
Rv2680_day32 | -1.854 | -0.816 |
H37Rv_KO_MarP | 0.017 | -0.814 |
hypoxia_3wks | -0.542 | -3.126 |
hypoxia_6wks | -0.791 | -2.907 |
glycerol | 0.489 | -3.553 |
cholesterol | 0.825 | -3.023 |
AJ | 0.069 | -3.504 |
Bibs02 | -2.568 | -2.595 |
Bibs02c | -2.402 | -4.611 |
BL6 | -0.618 | -0.535 |
BL6a | -1.078 | -3.566 |
BXD01 | -0.466 | -1.705 |
BXD010 | -0.187 | -2.903 |
BXD011 | -0.121 | -2.658 |
BXD03 | -0.881 | -3.156 |
BXD04 | 0.207 | -2.976 |
BXD05 | -1.268 | -2.368 |
BXD06 | -0.45 | -3.212 |
BXD07 | -0.109 | -1.52 |
BXD08 | -0.105 | -3.201 |
BXD09 | 0.725 | -2.312 |
CAST | -2.644 | -4.807 |
CCcont | -0.023 | -0.405 |
DS01 | -1.347 | -5.205 |
DS02 | -1.609 | -4.539 |
DS04 | -0.694 | -4.819 |
DS0c | 1.138 | -4.917 |
GP01 | -1.993 | -2.625 |
GP02 | -1.451 | -1.4 |
GP0c | -1.616 | -2.515 |
NOD | -1.222 | -4.815 |
NZO | 0.308 | -3.676 |
PWK | 0.918 | -4.322 |
H37Rv_KO_CtpC | 1.976 | -3.067 |
H37Rv_KO_CtpD | 1.535 | -1.532 |
H37Rv_KO_Rv1272 | -1.179 | -3.023 |
H37Rv_KO_SugABC | -1.335 | -1.743 |
H37Rv_KO_MbtN | -0.828 | 0.679 |
Trans05 | -0.02 | -2.879 |
macrophage_unactivated | -1.543 | -0.253 |
IL1 | -1.37 | -0.756 |
Rapamycin | -1.501 | -2.105 |
Tcell | -0.065 | -1.31 |
GMCSF | -0.684 | -0.673 |
IFNab | -0.713 | -0.632 |
IFNg | -0.887 | -0.81 |
IFNg_GMCSF1 | 0.358 | -2.357 |
Rv1432_day32 | -1.431 | -2.381 |
Rv1565c_day32 | -0.218 | -1.899 |
secA2_input | -0.415 | -0.629 |
delta_Rv3594 | 0.642 | 1.337 |
delta_Rv3717 | 0.659 | 1.472 |
delta_Rv3811 | 0.834 | 1.616 |
delta_Rv0954 | -0.023 | 0.076 |
PonA1 | 0.437 | -0.839 |
EccD1_KO | -0.395 | -2.664 |
EspI_KO | -0.083 | -3.719 |
PE35_KO | 0.041 | -2.185 |
PPE68_KO | 0.224 | -0.525 |
glycerol2 | 0.965 | 4.726 |
lignocerate | 1.355 | 1.218 |
oleate | -0.88 | -0.196 |
phosphatidylcholine | 0.885 | 3.018 |
acetate | 0.72 | 1.18 |
glucAc | 0.78 | 1.034 |
Rv0950ko | -1.227 | -1.851 |
Rv1096ko | 0.069 | -0.971 |
Rv3684ko | 0.396 | 0.305 |
delta_otsA_trehalose | 1.062 | 2.272 |