Top 10 genes with highest correlation to Rv3314c/deoA:
update plot | correlation | link to info on gene |
---|---|---|
Rv2038c/- | (cc=0.4941) | info on Rv2038c/- |
Rv2758c/vapB21 | (cc=0.4894) | info on Rv2758c/vapB21 |
Rv0093c/- | (cc=0.4721) | info on Rv0093c/- |
Rv1964/yrbE3A | (cc=0.4712) | info on Rv1964/yrbE3A |
Rv2871/vapB43 | (cc=0.4622) | info on Rv2871/vapB43 |
Rv2147c/- | (cc=0.4616) | info on Rv2147c/- |
Rv1128c/- | (cc=0.4494) | info on Rv1128c/- |
Rv3650/PE33 | (cc=0.4446) | info on Rv3650/PE33 |
Rv3036c/TB22.2 | (cc=0.4375) | info on Rv3036c/TB22.2 |
Rv3584/lpqE | (cc=0.4355) | info on Rv3584/lpqE |
Correlation of Rv3314c/deoA with Rv3650/PE33
Normalized LFCs for Rv3314c/deoA:
(description and provenance of datasets)
Rv3314c/deoA | Rv3650/PE33 | |
Fe_supp_jason_reseq | -0.672 | 3.01 |
low_pH_jason_reseq | 0.291 | 2.212 |
NO_jason_reseq | -0.753 | -1.78 |
B6_jason_reseq | -1.302 | -0.214 |
MHCII_jason_reseq | -1.01 | -0.663 |
Isoniazid02 | -0.217 | 1.394 |
Rifampicin4 | 0.203 | 0.812 |
Ethambutol3 | -0.198 | -0.14 |
Meropenem3 | 1.96 | 0.386 |
Vancomycin16 | 0.326 | 0.971 |
Rv2680_day32 | -0.435 | 0.803 |
H37Rv_KO_MarP | -0.562 | 0.147 |
hypoxia_3wks | -0.542 | 1.029 |
hypoxia_6wks | 0.061 | 1.777 |
glycerol | -0.519 | -0.554 |
cholesterol | -0.398 | -0.398 |
AJ | -0.479 | -0.637 |
Bibs02 | -1.229 | 1.249 |
Bibs02c | -1.155 | -0.174 |
BL6 | 0.574 | 1.909 |
BL6a | -0.254 | 2.986 |
BXD01 | 0.405 | 3.607 |
BXD010 | -0.224 | 1.662 |
BXD011 | -0.284 | 2.278 |
BXD03 | 0.053 | 1.623 |
BXD04 | 0.308 | 4.115 |
BXD05 | 0.018 | 3.431 |
BXD06 | 0.529 | 2.714 |
BXD07 | 0.018 | 3.558 |
BXD08 | 0.783 | 3.925 |
BXD09 | -0.038 | 3.04 |
CAST | -0.26 | 0.501 |
CCcont | 1.179 | 2.967 |
DS01 | -0.775 | 0.0 |
DS02 | -0.214 | 1.976 |
DS04 | -0.249 | -0.533 |
DS0c | -0.245 | -0.379 |
GP01 | 0.453 | 0.444 |
GP02 | -0.387 | 2.625 |
GP0c | 0.179 | 0.888 |
NOD | -0.778 | -0.617 |
NZO | -0.478 | -0.548 |
PWK | 0.026 | -0.539 |
H37Rv_KO_CtpC | 1.041 | 2.905 |
H37Rv_KO_CtpD | -0.088 | 1.193 |
H37Rv_KO_Rv1272 | 0.841 | -0.117 |
H37Rv_KO_SugABC | -0.99 | -0.272 |
H37Rv_KO_MbtN | 1.025 | 5.572 |
Trans05 | 1.346 | 3.09 |
macrophage_unactivated | 0.644 | 0.77 |
IL1 | 0.789 | 0.955 |
Rapamycin | 1.961 | 4.195 |
Tcell | 0.231 | 1.147 |
GMCSF | 0.187 | -0.9 |
IFNab | 0.759 | 1.451 |
IFNg | 0.831 | 4.918 |
IFNg_GMCSF1 | -0.484 | 0.346 |
Rv1432_day32 | 1.103 | -2.639 |
Rv1565c_day32 | 0.859 | -1.651 |
secA2_input | -0.866 | -1.722 |
delta_Rv3594 | 0.0 | 4.006 |
delta_Rv3717 | 0.191 | 2.037 |
delta_Rv3811 | -0.378 | 2.687 |
delta_Rv0954 | -0.262 | 1.862 |
PonA1 | -0.122 | -0.56 |
EccD1_KO | 0.086 | -2.983 |
EspI_KO | -0.819 | -0.773 |
PE35_KO | -0.656 | -3.661 |
PPE68_KO | -0.72 | -2.902 |
glycerol2 | 0.038 | 2.036 |
lignocerate | 0.558 | 1.867 |
oleate | -1.289 | -1.117 |
phosphatidylcholine | 0.181 | 0.854 |
acetate | 0.0 | 2.986 |
glucAc | 0.302 | 2.521 |
Rv0950ko | -0.95 | -2.844 |
Rv1096ko | -0.087 | -0.492 |
Rv3684ko | -0.386 | -0.462 |
delta_otsA_trehalose | 0.168 | 0.75 |