Top 10 genes with highest correlation to Rv3314c/deoA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2038c/- | (cc=0.4941) | info on Rv2038c/- |
| Rv2758c/vapB21 | (cc=0.4894) | info on Rv2758c/vapB21 |
| Rv0093c/- | (cc=0.4721) | info on Rv0093c/- |
| Rv1964/yrbE3A | (cc=0.4712) | info on Rv1964/yrbE3A |
| Rv2871/vapB43 | (cc=0.4622) | info on Rv2871/vapB43 |
| Rv2147c/- | (cc=0.4616) | info on Rv2147c/- |
| Rv1128c/- | (cc=0.4494) | info on Rv1128c/- |
| Rv3650/PE33 | (cc=0.4446) | info on Rv3650/PE33 |
| Rv3036c/TB22.2 | (cc=0.4375) | info on Rv3036c/TB22.2 |
| Rv3584/lpqE | (cc=0.4355) | info on Rv3584/lpqE |
Correlation of Rv3314c/deoA with Rv0093c/-
Normalized LFCs for Rv3314c/deoA:
(description and provenance of datasets)
| Rv3314c/deoA | Rv0093c/- | |
| Fe_supp_jason_reseq | -0.672 | 0.38 |
| low_pH_jason_reseq | 0.291 | -1.673 |
| NO_jason_reseq | -0.753 | -0.268 |
| B6_jason_reseq | -1.302 | -0.153 |
| MHCII_jason_reseq | -1.01 | 0.288 |
| Isoniazid02 | -0.217 | -0.615 |
| Rifampicin4 | 0.203 | -0.39 |
| Ethambutol3 | -0.198 | 0.185 |
| Meropenem3 | 1.96 | 0.849 |
| Vancomycin16 | 0.326 | -0.661 |
| Rv2680_day32 | -0.435 | 0.319 |
| H37Rv_KO_MarP | -0.562 | 0.119 |
| hypoxia_3wks | -0.542 | -0.116 |
| hypoxia_6wks | 0.061 | -0.061 |
| glycerol | -0.519 | 0.98 |
| cholesterol | -0.398 | 0.681 |
| AJ | -0.479 | 0.792 |
| Bibs02 | -1.229 | -0.493 |
| Bibs02c | -1.155 | -1.725 |
| BL6 | 0.574 | 0.95 |
| BL6a | -0.254 | 0.346 |
| BXD01 | 0.405 | -0.311 |
| BXD010 | -0.224 | -0.704 |
| BXD011 | -0.284 | 0.143 |
| BXD03 | 0.053 | 0.53 |
| BXD04 | 0.308 | 1.275 |
| BXD05 | 0.018 | 0.389 |
| BXD06 | 0.529 | 0.523 |
| BXD07 | 0.018 | 0.032 |
| BXD08 | 0.783 | 0.899 |
| BXD09 | -0.038 | 0.455 |
| CAST | -0.26 | -0.29 |
| CCcont | 1.179 | 1.552 |
| DS01 | -0.775 | -1.116 |
| DS02 | -0.214 | -0.394 |
| DS04 | -0.249 | 1.311 |
| DS0c | -0.245 | 0.665 |
| GP01 | 0.453 | -0.867 |
| GP02 | -0.387 | -0.936 |
| GP0c | 0.179 | 0.201 |
| NOD | -0.778 | -1.422 |
| NZO | -0.478 | -0.147 |
| PWK | 0.026 | -0.247 |
| H37Rv_KO_CtpC | 1.041 | 0.379 |
| H37Rv_KO_CtpD | -0.088 | -0.341 |
| H37Rv_KO_Rv1272 | 0.841 | 0.786 |
| H37Rv_KO_SugABC | -0.99 | -1.345 |
| H37Rv_KO_MbtN | 1.025 | 1.045 |
| Trans05 | 1.346 | 0.147 |
| macrophage_unactivated | 0.644 | 0.303 |
| IL1 | 0.789 | 1.376 |
| Rapamycin | 1.961 | 0.049 |
| Tcell | 0.231 | 0.108 |
| GMCSF | 0.187 | 1.064 |
| IFNab | 0.759 | 0.197 |
| IFNg | 0.831 | 1.547 |
| IFNg_GMCSF1 | -0.484 | 0.352 |
| Rv1432_day32 | 1.103 | 1.512 |
| Rv1565c_day32 | 0.859 | 0.0 |
| secA2_input | -0.866 | 1.124 |
| delta_Rv3594 | 0.0 | 0.275 |
| delta_Rv3717 | 0.191 | 0.188 |
| delta_Rv3811 | -0.378 | -0.275 |
| delta_Rv0954 | -0.262 | -0.7 |
| PonA1 | -0.122 | -1.019 |
| EccD1_KO | 0.086 | -1.654 |
| EspI_KO | -0.819 | -0.742 |
| PE35_KO | -0.656 | -1.327 |
| PPE68_KO | -0.72 | -1.533 |
| glycerol2 | 0.038 | 0.638 |
| lignocerate | 0.558 | 1.46 |
| oleate | -1.289 | -1.836 |
| phosphatidylcholine | 0.181 | 0.144 |
| acetate | 0.0 | 1.478 |
| glucAc | 0.302 | 1.779 |
| Rv0950ko | -0.95 | -0.488 |
| Rv1096ko | -0.087 | -0.271 |
| Rv3684ko | -0.386 | -1.127 |
| delta_otsA_trehalose | 0.168 | -0.475 |