Top 10 genes with highest correlation to Rv3314c/deoA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2038c/- | (cc=0.4941) | info on Rv2038c/- |
| Rv2758c/vapB21 | (cc=0.4894) | info on Rv2758c/vapB21 |
| Rv0093c/- | (cc=0.4721) | info on Rv0093c/- |
| Rv1964/yrbE3A | (cc=0.4712) | info on Rv1964/yrbE3A |
| Rv2871/vapB43 | (cc=0.4622) | info on Rv2871/vapB43 |
| Rv2147c/- | (cc=0.4616) | info on Rv2147c/- |
| Rv1128c/- | (cc=0.4494) | info on Rv1128c/- |
| Rv3650/PE33 | (cc=0.4446) | info on Rv3650/PE33 |
| Rv3036c/TB22.2 | (cc=0.4375) | info on Rv3036c/TB22.2 |
| Rv3584/lpqE | (cc=0.4355) | info on Rv3584/lpqE |
Correlation of Rv3314c/deoA with Rv2038c/-
Normalized LFCs for Rv3314c/deoA:
(description and provenance of datasets)
| Rv3314c/deoA | Rv2038c/- | |
| Fe_supp_jason_reseq | -0.672 | -1.699 |
| low_pH_jason_reseq | 0.291 | -0.127 |
| NO_jason_reseq | -0.753 | -0.465 |
| B6_jason_reseq | -1.302 | -2.64 |
| MHCII_jason_reseq | -1.01 | -0.977 |
| Isoniazid02 | -0.217 | 0.115 |
| Rifampicin4 | 0.203 | -0.149 |
| Ethambutol3 | -0.198 | -0.067 |
| Meropenem3 | 1.96 | -0.321 |
| Vancomycin16 | 0.326 | 0.21 |
| Rv2680_day32 | -0.435 | -1.358 |
| H37Rv_KO_MarP | -0.562 | 0.207 |
| hypoxia_3wks | -0.542 | -0.183 |
| hypoxia_6wks | 0.061 | 1.462 |
| glycerol | -0.519 | -1.252 |
| cholesterol | -0.398 | -1.217 |
| AJ | -0.479 | -0.494 |
| Bibs02 | -1.229 | -1.537 |
| Bibs02c | -1.155 | -0.591 |
| BL6 | 0.574 | 1.212 |
| BL6a | -0.254 | 0.106 |
| BXD01 | 0.405 | -0.074 |
| BXD010 | -0.224 | 0.34 |
| BXD011 | -0.284 | 0.888 |
| BXD03 | 0.053 | 0.622 |
| BXD04 | 0.308 | 0.612 |
| BXD05 | 0.018 | 1.52 |
| BXD06 | 0.529 | 0.438 |
| BXD07 | 0.018 | 0.731 |
| BXD08 | 0.783 | 0.849 |
| BXD09 | -0.038 | 0.979 |
| CAST | -0.26 | 0.184 |
| CCcont | 1.179 | 0.764 |
| DS01 | -0.775 | -0.936 |
| DS02 | -0.214 | -1.575 |
| DS04 | -0.249 | -0.225 |
| DS0c | -0.245 | -0.251 |
| GP01 | 0.453 | 1.204 |
| GP02 | -0.387 | 0.544 |
| GP0c | 0.179 | 0.598 |
| NOD | -0.778 | -0.404 |
| NZO | -0.478 | 0.306 |
| PWK | 0.026 | -0.627 |
| H37Rv_KO_CtpC | 1.041 | 0.087 |
| H37Rv_KO_CtpD | -0.088 | 1.034 |
| H37Rv_KO_Rv1272 | 0.841 | 1.002 |
| H37Rv_KO_SugABC | -0.99 | 0.784 |
| H37Rv_KO_MbtN | 1.025 | 1.145 |
| Trans05 | 1.346 | 2.398 |
| macrophage_unactivated | 0.644 | -0.246 |
| IL1 | 0.789 | 1.397 |
| Rapamycin | 1.961 | -0.239 |
| Tcell | 0.231 | 0.544 |
| GMCSF | 0.187 | 0.38 |
| IFNab | 0.759 | 0.834 |
| IFNg | 0.831 | 0.738 |
| IFNg_GMCSF1 | -0.484 | 0.93 |
| Rv1432_day32 | 1.103 | -0.614 |
| Rv1565c_day32 | 0.859 | 0.096 |
| secA2_input | -0.866 | -0.504 |
| delta_Rv3594 | 0.0 | 0.035 |
| delta_Rv3717 | 0.191 | -0.218 |
| delta_Rv3811 | -0.378 | 0.034 |
| delta_Rv0954 | -0.262 | -0.864 |
| PonA1 | -0.122 | -2.363 |
| EccD1_KO | 0.086 | 0.914 |
| EspI_KO | -0.819 | -0.257 |
| PE35_KO | -0.656 | 0.187 |
| PPE68_KO | -0.72 | -0.678 |
| glycerol2 | 0.038 | 0.607 |
| lignocerate | 0.558 | 1.538 |
| oleate | -1.289 | -1.418 |
| phosphatidylcholine | 0.181 | 0.531 |
| acetate | 0.0 | 1.998 |
| glucAc | 0.302 | 1.735 |
| Rv0950ko | -0.95 | -1.049 |
| Rv1096ko | -0.087 | 0.0 |
| Rv3684ko | -0.386 | -0.727 |
| delta_otsA_trehalose | 0.168 | 0.087 |