Top 10 genes with highest correlation to Rv3270/ctpC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0407/fgd1 | (cc=0.58) | info on Rv0407/fgd1 |
| Rv3261/fbiA | (cc=0.5602) | info on Rv3261/fbiA |
| Rv0989c/grcC2 | (cc=0.5482) | info on Rv0989c/grcC2 |
| Rv3269/- | (cc=0.5427) | info on Rv3269/- |
| Rv0245/- | (cc=0.4926) | info on Rv0245/- |
| Rv2973c/recG | (cc=0.4891) | info on Rv2973c/recG |
| Rv2737c/recA | (cc=0.4848) | info on Rv2737c/recA |
| Rv2206/- | (cc=0.4655) | info on Rv2206/- |
| Rv3262/fbiB | (cc=0.4646) | info on Rv3262/fbiB |
| Rv1008/tatD | (cc=0.4646) | info on Rv1008/tatD |
Correlation of Rv3270/ctpC with Rv3269/-
Normalized LFCs for Rv3270/ctpC:
(description and provenance of datasets)
| Rv3270/ctpC | Rv3269/- | |
| Fe_supp_jason_reseq | 1.994 | 2.502 |
| low_pH_jason_reseq | 2.352 | -0.811 |
| NO_jason_reseq | -2.263 | -1.273 |
| B6_jason_reseq | 0.078 | -0.119 |
| MHCII_jason_reseq | 0.0 | 0.189 |
| Isoniazid02 | 1.371 | 1.759 |
| Rifampicin4 | 1.454 | -0.523 |
| Ethambutol3 | -0.931 | -0.399 |
| Meropenem3 | 1.563 | -0.648 |
| Vancomycin16 | -0.154 | -1.995 |
| Rv2680_day32 | 0.588 | 0.0 |
| H37Rv_KO_MarP | -1.806 | -1.411 |
| hypoxia_3wks | -3.72 | -3.218 |
| hypoxia_6wks | -1.948 | -1.815 |
| glycerol | 2.519 | 0.0 |
| cholesterol | 2.06 | 2.81 |
| AJ | 0.442 | 1.425 |
| Bibs02 | 0.0 | 0.183 |
| Bibs02c | 0.0 | 0.0 |
| BL6 | 0.439 | 0.125 |
| BL6a | 1.217 | 1.897 |
| BXD01 | 0.64 | 1.247 |
| BXD010 | 0.0 | 0.128 |
| BXD011 | 0.54 | 0.987 |
| BXD03 | 0.0 | 0.475 |
| BXD04 | 0.0 | 0.0 |
| BXD05 | 0.256 | 0.135 |
| BXD06 | 0.741 | 0.366 |
| BXD07 | 0.38 | 0.851 |
| BXD08 | 0.467 | 0.133 |
| BXD09 | 0.596 | 0.943 |
| CAST | 0.23 | 0.439 |
| CCcont | 3.303 | 3.546 |
| DS01 | 2.452 | 1.451 |
| DS02 | 2.782 | 0.0 |
| DS04 | 1.192 | 0.822 |
| DS0c | 1.204 | 0.0 |
| GP01 | 0.0 | 0.0 |
| GP02 | 0.0 | 0.0 |
| GP0c | 0.0 | 0.0 |
| NOD | 0.0 | 0.0 |
| NZO | 1.225 | 0.701 |
| PWK | 1.52 | 0.374 |
| H37Rv_KO_CtpC | 0.162 | 2.984 |
| H37Rv_KO_CtpD | 0.127 | 0.537 |
| H37Rv_KO_Rv1272 | 0.269 | 0.141 |
| H37Rv_KO_SugABC | 2.444 | 1.066 |
| H37Rv_KO_MbtN | 1.319 | 1.109 |
| Trans05 | 0.249 | 0.249 |
| macrophage_unactivated | -1.31 | -0.275 |
| IL1 | -1.528 | -1.863 |
| Rapamycin | -0.466 | -1.188 |
| Tcell | -1.352 | -1.639 |
| GMCSF | -0.401 | -1.328 |
| IFNab | 0.212 | -0.547 |
| IFNg | -0.406 | -1.034 |
| IFNg_GMCSF1 | 0.0 | -2.407 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 1.422 | 1.895 |
| secA2_input | 0.16 | -1.691 |
| delta_Rv3594 | 0.064 | 2.951 |
| delta_Rv3717 | -0.092 | 2.246 |
| delta_Rv3811 | 0.454 | 2.342 |
| delta_Rv0954 | -0.811 | 0.391 |
| PonA1 | -0.364 | 1.1 |
| EccD1_KO | 0.079 | -1.825 |
| EspI_KO | -0.667 | -0.75 |
| PE35_KO | 0.767 | 0.548 |
| PPE68_KO | 0.224 | -0.618 |
| glycerol2 | -0.509 | -1.6 |
| lignocerate | 0.6 | -1.529 |
| oleate | -1.494 | -1.187 |
| phosphatidylcholine | -0.413 | -2.094 |
| acetate | 1.478 | -1.034 |
| glucAc | 1.563 | -0.899 |
| Rv0950ko | -0.347 | 0.862 |
| Rv1096ko | -0.259 | -1.559 |
| Rv3684ko | 0.432 | 0.0 |
| delta_otsA_trehalose | -1.453 | -0.204 |