Top 10 genes with highest correlation to Rv3270/ctpC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0407/fgd1 | (cc=0.58) | info on Rv0407/fgd1 |
| Rv3261/fbiA | (cc=0.5602) | info on Rv3261/fbiA |
| Rv0989c/grcC2 | (cc=0.5482) | info on Rv0989c/grcC2 |
| Rv3269/- | (cc=0.5427) | info on Rv3269/- |
| Rv0245/- | (cc=0.4926) | info on Rv0245/- |
| Rv2973c/recG | (cc=0.4891) | info on Rv2973c/recG |
| Rv2737c/recA | (cc=0.4848) | info on Rv2737c/recA |
| Rv2206/- | (cc=0.4655) | info on Rv2206/- |
| Rv3262/fbiB | (cc=0.4646) | info on Rv3262/fbiB |
| Rv1008/tatD | (cc=0.4646) | info on Rv1008/tatD |
Correlation of Rv3270/ctpC with Rv0245/-
Normalized LFCs for Rv3270/ctpC:
(description and provenance of datasets)
| Rv3270/ctpC | Rv0245/- | |
| Fe_supp_jason_reseq | 1.994 | 2.145 |
| low_pH_jason_reseq | 2.352 | -0.592 |
| NO_jason_reseq | -2.263 | 1.005 |
| B6_jason_reseq | 0.078 | -1.334 |
| MHCII_jason_reseq | 0.0 | -0.804 |
| Isoniazid02 | 1.371 | 0.134 |
| Rifampicin4 | 1.454 | 0.91 |
| Ethambutol3 | -0.931 | -0.384 |
| Meropenem3 | 1.563 | 0.069 |
| Vancomycin16 | -0.154 | 1.677 |
| Rv2680_day32 | 0.588 | 1.357 |
| H37Rv_KO_MarP | -1.806 | -0.508 |
| hypoxia_3wks | -3.72 | -0.427 |
| hypoxia_6wks | -1.948 | -0.796 |
| glycerol | 2.519 | 2.836 |
| cholesterol | 2.06 | -0.132 |
| AJ | 0.442 | 0.983 |
| Bibs02 | 0.0 | -0.348 |
| Bibs02c | 0.0 | 0.629 |
| BL6 | 0.439 | 0.456 |
| BL6a | 1.217 | 1.679 |
| BXD01 | 0.64 | 1.457 |
| BXD010 | 0.0 | 0.871 |
| BXD011 | 0.54 | 1.306 |
| BXD03 | 0.0 | 0.92 |
| BXD04 | 0.0 | 1.184 |
| BXD05 | 0.256 | 1.032 |
| BXD06 | 0.741 | 1.57 |
| BXD07 | 0.38 | 1.668 |
| BXD08 | 0.467 | 0.564 |
| BXD09 | 0.596 | 1.941 |
| CAST | 0.23 | 0.192 |
| CCcont | 3.303 | 4.343 |
| DS01 | 2.452 | 1.261 |
| DS02 | 2.782 | 0.35 |
| DS04 | 1.192 | 2.389 |
| DS0c | 1.204 | 0.79 |
| GP01 | 0.0 | 0.159 |
| GP02 | 0.0 | -0.159 |
| GP0c | 0.0 | 1.151 |
| NOD | 0.0 | 0.0 |
| NZO | 1.225 | 0.727 |
| PWK | 1.52 | 0.315 |
| H37Rv_KO_CtpC | 0.162 | -0.148 |
| H37Rv_KO_CtpD | 0.127 | 0.676 |
| H37Rv_KO_Rv1272 | 0.269 | -0.269 |
| H37Rv_KO_SugABC | 2.444 | 2.205 |
| H37Rv_KO_MbtN | 1.319 | 0.603 |
| Trans05 | 0.249 | 0.698 |
| macrophage_unactivated | -1.31 | 1.098 |
| IL1 | -1.528 | -2.251 |
| Rapamycin | -0.466 | 0.0 |
| Tcell | -1.352 | -1.496 |
| GMCSF | -0.401 | 0.779 |
| IFNab | 0.212 | 0.193 |
| IFNg | -0.406 | -1.743 |
| IFNg_GMCSF1 | 0.0 | 1.093 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 1.422 | 2.829 |
| secA2_input | 0.16 | -1.007 |
| delta_Rv3594 | 0.064 | 1.504 |
| delta_Rv3717 | -0.092 | -1.058 |
| delta_Rv3811 | 0.454 | 0.983 |
| delta_Rv0954 | -0.811 | 1.292 |
| PonA1 | -0.364 | 1.549 |
| EccD1_KO | 0.079 | 0.112 |
| EspI_KO | -0.667 | 1.486 |
| PE35_KO | 0.767 | 2.529 |
| PPE68_KO | 0.224 | 1.475 |
| glycerol2 | -0.509 | -0.394 |
| lignocerate | 0.6 | -0.303 |
| oleate | -1.494 | -0.991 |
| phosphatidylcholine | -0.413 | -1.0 |
| acetate | 1.478 | 0.66 |
| glucAc | 1.563 | 0.793 |
| Rv0950ko | -0.347 | 0.03 |
| Rv1096ko | -0.259 | -0.838 |
| Rv3684ko | 0.432 | 0.612 |
| delta_otsA_trehalose | -1.453 | -0.11 |