Top 10 genes with highest correlation to Rv3251c/rubA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2140c/TB18.6 | (cc=0.4828) | info on Rv2140c/TB18.6 |
| Rv1819c/bacA | (cc=0.4461) | info on Rv1819c/bacA |
| Rv2613c/- | (cc=0.4176) | info on Rv2613c/- |
| Rv1473/- | (cc=0.4141) | info on Rv1473/- |
| Rv0839/- | (cc=0.4065) | info on Rv0839/- |
| Rv3055/- | (cc=0.394) | info on Rv3055/- |
| Rv2359/zur | (cc=0.3867) | info on Rv2359/zur |
| Rv1541c/lprI | (cc=0.3831) | info on Rv1541c/lprI |
| Rv2409c/- | (cc=0.3808) | info on Rv2409c/- |
| Rv2599/- | (cc=0.3806) | info on Rv2599/- |
Correlation of Rv3251c/rubA with Rv1541c/lprI
Normalized LFCs for Rv3251c/rubA:
(description and provenance of datasets)
| Rv3251c/rubA | Rv1541c/lprI | |
| Fe_supp_jason_reseq | 0.575 | 0.584 |
| low_pH_jason_reseq | -1.574 | -0.018 |
| NO_jason_reseq | 0.221 | -0.273 |
| B6_jason_reseq | -0.698 | 0.556 |
| MHCII_jason_reseq | 0.698 | 0.95 |
| Isoniazid02 | -1.745 | -0.221 |
| Rifampicin4 | 0.896 | -0.95 |
| Ethambutol3 | 0.805 | -0.606 |
| Meropenem3 | 0.703 | -0.403 |
| Vancomycin16 | -0.085 | 0.119 |
| Rv2680_day32 | 1.918 | -0.761 |
| H37Rv_KO_MarP | 0.607 | 0.102 |
| hypoxia_3wks | -1.128 | -0.865 |
| hypoxia_6wks | -0.332 | -0.269 |
| glycerol | 0.679 | 0.149 |
| cholesterol | 0.205 | 0.509 |
| AJ | -0.294 | -0.328 |
| Bibs02 | -1.086 | -0.388 |
| Bibs02c | 0.555 | -0.129 |
| BL6 | -0.34 | -1.601 |
| BL6a | -0.778 | -0.908 |
| BXD01 | -0.585 | -1.507 |
| BXD010 | -1.455 | -1.417 |
| BXD011 | 0.228 | -0.502 |
| BXD03 | -0.088 | -1.941 |
| BXD04 | -0.762 | -0.714 |
| BXD05 | -0.043 | 0.073 |
| BXD06 | 0.239 | -1.043 |
| BXD07 | -0.343 | -1.132 |
| BXD08 | 0.009 | -0.413 |
| BXD09 | -0.282 | -1.189 |
| CAST | -0.292 | 0.447 |
| CCcont | 0.639 | -0.356 |
| DS01 | -0.842 | -0.21 |
| DS02 | -1.292 | 0.082 |
| DS04 | -0.988 | 0.136 |
| DS0c | -0.812 | -0.028 |
| GP01 | 0.614 | -1.487 |
| GP02 | -1.306 | -0.931 |
| GP0c | -1.213 | -2.106 |
| NOD | -0.116 | 0.355 |
| NZO | 0.49 | -0.981 |
| PWK | 0.287 | -0.575 |
| H37Rv_KO_CtpC | 1.016 | 0.415 |
| H37Rv_KO_CtpD | 0.391 | -0.142 |
| H37Rv_KO_Rv1272 | -0.179 | -0.299 |
| H37Rv_KO_SugABC | 0.705 | -0.253 |
| H37Rv_KO_MbtN | -0.434 | -1.275 |
| Trans05 | 0.032 | 0.686 |
| macrophage_unactivated | 1.411 | 0.597 |
| IL1 | -0.86 | -0.507 |
| Rapamycin | 0.0 | 0.66 |
| Tcell | -0.108 | 0.469 |
| GMCSF | -1.019 | 1.811 |
| IFNab | -1.04 | -0.251 |
| IFNg | -2.673 | 0.235 |
| IFNg_GMCSF1 | 0.902 | 0.968 |
| Rv1432_day32 | 0.164 | -0.926 |
| Rv1565c_day32 | 0.466 | 0.114 |
| secA2_input | 0.412 | -1.39 |
| delta_Rv3594 | 0.219 | 0.895 |
| delta_Rv3717 | -0.75 | -1.486 |
| delta_Rv3811 | 0.47 | 0.22 |
| delta_Rv0954 | 0.579 | 0.908 |
| PonA1 | -0.223 | 0.417 |
| EccD1_KO | 1.513 | 1.615 |
| EspI_KO | 1.5 | 1.058 |
| PE35_KO | 1.243 | 2.228 |
| PPE68_KO | 1.881 | 2.054 |
| glycerol2 | 0.73 | -0.076 |
| lignocerate | 0.319 | 0.863 |
| oleate | -0.214 | -0.817 |
| phosphatidylcholine | 0.398 | 0.21 |
| acetate | -0.03 | 0.77 |
| glucAc | 0.513 | 0.92 |
| Rv0950ko | 0.311 | 0.217 |
| Rv1096ko | -0.498 | -0.172 |
| Rv3684ko | -0.517 | -0.648 |
| delta_otsA_trehalose | -1.796 | -1.918 |