Top 10 genes with highest correlation to Rv3251c/rubA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2140c/TB18.6 | (cc=0.4828) | info on Rv2140c/TB18.6 |
| Rv1819c/bacA | (cc=0.4461) | info on Rv1819c/bacA |
| Rv2613c/- | (cc=0.4176) | info on Rv2613c/- |
| Rv1473/- | (cc=0.4141) | info on Rv1473/- |
| Rv0839/- | (cc=0.4065) | info on Rv0839/- |
| Rv3055/- | (cc=0.394) | info on Rv3055/- |
| Rv2359/zur | (cc=0.3867) | info on Rv2359/zur |
| Rv1541c/lprI | (cc=0.3831) | info on Rv1541c/lprI |
| Rv2409c/- | (cc=0.3808) | info on Rv2409c/- |
| Rv2599/- | (cc=0.3806) | info on Rv2599/- |
Correlation of Rv3251c/rubA with Rv1473/-
Normalized LFCs for Rv3251c/rubA:
(description and provenance of datasets)
| Rv3251c/rubA | Rv1473/- | |
| Fe_supp_jason_reseq | 0.575 | 1.664 |
| low_pH_jason_reseq | -1.574 | 0.179 |
| NO_jason_reseq | 0.221 | 0.281 |
| B6_jason_reseq | -0.698 | -0.421 |
| MHCII_jason_reseq | 0.698 | 1.03 |
| Isoniazid02 | -1.745 | -0.141 |
| Rifampicin4 | 0.896 | 0.141 |
| Ethambutol3 | 0.805 | 0.353 |
| Meropenem3 | 0.703 | 0.545 |
| Vancomycin16 | -0.085 | 0.403 |
| Rv2680_day32 | 1.918 | 1.437 |
| H37Rv_KO_MarP | 0.607 | -0.313 |
| hypoxia_3wks | -1.128 | -1.132 |
| hypoxia_6wks | -0.332 | -2.088 |
| glycerol | 0.679 | 2.61 |
| cholesterol | 0.205 | 0.871 |
| AJ | -0.294 | -1.55 |
| Bibs02 | -1.086 | -0.167 |
| Bibs02c | 0.555 | 0.674 |
| BL6 | -0.34 | -1.06 |
| BL6a | -0.778 | 0.057 |
| BXD01 | -0.585 | -1.386 |
| BXD010 | -1.455 | -1.363 |
| BXD011 | 0.228 | -1.165 |
| BXD03 | -0.088 | -1.553 |
| BXD04 | -0.762 | -1.316 |
| BXD05 | -0.043 | -1.055 |
| BXD06 | 0.239 | -1.221 |
| BXD07 | -0.343 | -1.174 |
| BXD08 | 0.009 | -1.527 |
| BXD09 | -0.282 | -1.286 |
| CAST | -0.292 | -1.952 |
| CCcont | 0.639 | 1.227 |
| DS01 | -0.842 | -0.14 |
| DS02 | -1.292 | -1.226 |
| DS04 | -0.988 | -1.192 |
| DS0c | -0.812 | -0.064 |
| GP01 | 0.614 | 0.811 |
| GP02 | -1.306 | -0.603 |
| GP0c | -1.213 | -0.391 |
| NOD | -0.116 | -1.38 |
| NZO | 0.49 | -1.825 |
| PWK | 0.287 | -2.087 |
| H37Rv_KO_CtpC | 1.016 | -0.835 |
| H37Rv_KO_CtpD | 0.391 | 0.173 |
| H37Rv_KO_Rv1272 | -0.179 | -0.942 |
| H37Rv_KO_SugABC | 0.705 | 1.128 |
| H37Rv_KO_MbtN | -0.434 | 0.086 |
| Trans05 | 0.032 | -0.803 |
| macrophage_unactivated | 1.411 | 0.802 |
| IL1 | -0.86 | -1.344 |
| Rapamycin | 0.0 | -0.175 |
| Tcell | -0.108 | -1.004 |
| GMCSF | -1.019 | -0.15 |
| IFNab | -1.04 | -0.348 |
| IFNg | -2.673 | -1.638 |
| IFNg_GMCSF1 | 0.902 | -0.757 |
| Rv1432_day32 | 0.164 | 0.992 |
| Rv1565c_day32 | 0.466 | 1.515 |
| secA2_input | 0.412 | 1.623 |
| delta_Rv3594 | 0.219 | 2.688 |
| delta_Rv3717 | -0.75 | 0.82 |
| delta_Rv3811 | 0.47 | 2.104 |
| delta_Rv0954 | 0.579 | 1.005 |
| PonA1 | -0.223 | 1.445 |
| EccD1_KO | 1.513 | 0.539 |
| EspI_KO | 1.5 | 1.474 |
| PE35_KO | 1.243 | 1.193 |
| PPE68_KO | 1.881 | 1.6 |
| glycerol2 | 0.73 | -0.615 |
| lignocerate | 0.319 | -0.785 |
| oleate | -0.214 | -1.195 |
| phosphatidylcholine | 0.398 | -0.803 |
| acetate | -0.03 | 0.527 |
| glucAc | 0.513 | 0.707 |
| Rv0950ko | 0.311 | -0.932 |
| Rv1096ko | -0.498 | -1.559 |
| Rv3684ko | -0.517 | -1.228 |
| delta_otsA_trehalose | -1.796 | 1.844 |