Top 10 genes with highest correlation to Rv3199c/nudC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1533/- | (cc=0.4843) | info on Rv1533/- |
| Rv3787c/- | (cc=0.4667) | info on Rv3787c/- |
| Rv0701/rplC | (cc=0.4364) | info on Rv0701/rplC |
| Rv1726/- | (cc=0.4303) | info on Rv1726/- |
| Rv0342/iniA | (cc=0.4279) | info on Rv0342/iniA |
| Rv0968/- | (cc=0.4104) | info on Rv0968/- |
| Rv2164c/- | (cc=0.4031) | info on Rv2164c/- |
| Rv2719c/- | (cc=0.3943) | info on Rv2719c/- |
| Rv0145/- | (cc=0.3907) | info on Rv0145/- |
| Rv0588/yrbE2B | (cc=0.3858) | info on Rv0588/yrbE2B |
Correlation of Rv3199c/nudC with Rv1726/-
Normalized LFCs for Rv3199c/nudC:
(description and provenance of datasets)
| Rv3199c/nudC | Rv1726/- | |
| Fe_supp_jason_reseq | -0.95 | -0.541 |
| low_pH_jason_reseq | -0.795 | -0.502 |
| NO_jason_reseq | -0.47 | 0.727 |
| B6_jason_reseq | 0.17 | 0.182 |
| MHCII_jason_reseq | -1.222 | 0.394 |
| Isoniazid02 | -1.491 | -2.193 |
| Rifampicin4 | 0.682 | -0.623 |
| Ethambutol3 | -1.409 | -1.188 |
| Meropenem3 | -1.422 | -2.035 |
| Vancomycin16 | -0.57 | -0.942 |
| Rv2680_day32 | -0.374 | -0.623 |
| H37Rv_KO_MarP | 0.365 | -0.144 |
| hypoxia_3wks | -0.786 | 0.343 |
| hypoxia_6wks | -0.393 | 0.198 |
| glycerol | 0.584 | -0.032 |
| cholesterol | -0.992 | -0.173 |
| AJ | 0.41 | 0.82 |
| Bibs02 | -0.021 | 0.009 |
| Bibs02c | 0.441 | 0.142 |
| BL6 | -0.913 | 0.437 |
| BL6a | -0.131 | -0.065 |
| BXD01 | 0.497 | -0.306 |
| BXD010 | -0.524 | -0.362 |
| BXD011 | -0.83 | -0.674 |
| BXD03 | -0.159 | -0.154 |
| BXD04 | 0.949 | 0.506 |
| BXD05 | -0.335 | -0.316 |
| BXD06 | -0.294 | 0.049 |
| BXD07 | -0.497 | -0.493 |
| BXD08 | -0.715 | -0.089 |
| BXD09 | -0.663 | -0.283 |
| CAST | -0.864 | -0.494 |
| CCcont | -0.372 | -0.928 |
| DS01 | -0.293 | 0.577 |
| DS02 | -0.038 | 0.843 |
| DS04 | -0.082 | 1.304 |
| DS0c | 0.811 | 0.0 |
| GP01 | 0.25 | 0.433 |
| GP02 | 0.127 | 0.396 |
| GP0c | -0.25 | -0.462 |
| NOD | -0.415 | -0.604 |
| NZO | -0.497 | -0.11 |
| PWK | -0.217 | -0.344 |
| H37Rv_KO_CtpC | -0.873 | -0.175 |
| H37Rv_KO_CtpD | 0.701 | 0.862 |
| H37Rv_KO_Rv1272 | 1.622 | 0.0 |
| H37Rv_KO_SugABC | 1.681 | 1.181 |
| H37Rv_KO_MbtN | 0.307 | -0.13 |
| Trans05 | -0.924 | 0.379 |
| macrophage_unactivated | -0.133 | 0.243 |
| IL1 | -0.955 | 0.285 |
| Rapamycin | 0.979 | 0.568 |
| Tcell | 0.508 | 0.342 |
| GMCSF | -0.264 | 0.227 |
| IFNab | -1.185 | 0.26 |
| IFNg | -0.954 | 0.401 |
| IFNg_GMCSF1 | 0.129 | 0.899 |
| Rv1432_day32 | -0.395 | 0.567 |
| Rv1565c_day32 | -0.406 | 0.676 |
| secA2_input | 0.697 | 0.147 |
| delta_Rv3594 | -0.214 | -0.303 |
| delta_Rv3717 | 0.196 | -0.18 |
| delta_Rv3811 | -0.036 | 0.126 |
| delta_Rv0954 | -0.062 | 0.121 |
| PonA1 | 0.305 | 0.14 |
| EccD1_KO | -0.648 | -0.237 |
| EspI_KO | -1.871 | -0.077 |
| PE35_KO | -1.018 | -0.578 |
| PPE68_KO | -2.48 | -0.381 |
| glycerol2 | -0.102 | -0.147 |
| lignocerate | -0.247 | -0.057 |
| oleate | 0.05 | -0.22 |
| phosphatidylcholine | -0.137 | 0.063 |
| acetate | -0.304 | -0.362 |
| glucAc | -0.85 | -0.503 |
| Rv0950ko | -0.859 | 0.247 |
| Rv1096ko | 0.642 | 1.188 |
| Rv3684ko | -0.458 | 0.583 |
| delta_otsA_trehalose | 0.221 | 2.62 |