Top 10 genes with highest correlation to Rv3199c/nudC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1533/- | (cc=0.4843) | info on Rv1533/- |
| Rv3787c/- | (cc=0.4667) | info on Rv3787c/- |
| Rv0701/rplC | (cc=0.4364) | info on Rv0701/rplC |
| Rv1726/- | (cc=0.4303) | info on Rv1726/- |
| Rv0342/iniA | (cc=0.4279) | info on Rv0342/iniA |
| Rv0968/- | (cc=0.4104) | info on Rv0968/- |
| Rv2164c/- | (cc=0.4031) | info on Rv2164c/- |
| Rv2719c/- | (cc=0.3943) | info on Rv2719c/- |
| Rv0145/- | (cc=0.3907) | info on Rv0145/- |
| Rv0588/yrbE2B | (cc=0.3858) | info on Rv0588/yrbE2B |
Correlation of Rv3199c/nudC with Rv0342/iniA
Normalized LFCs for Rv3199c/nudC:
(description and provenance of datasets)
| Rv3199c/nudC | Rv0342/iniA | |
| Fe_supp_jason_reseq | -0.95 | -0.583 |
| low_pH_jason_reseq | -0.795 | -0.781 |
| NO_jason_reseq | -0.47 | 0.795 |
| B6_jason_reseq | 0.17 | 0.252 |
| MHCII_jason_reseq | -1.222 | 0.5 |
| Isoniazid02 | -1.491 | -2.219 |
| Rifampicin4 | 0.682 | 0.33 |
| Ethambutol3 | -1.409 | -2.382 |
| Meropenem3 | -1.422 | -1.242 |
| Vancomycin16 | -0.57 | -0.7 |
| Rv2680_day32 | -0.374 | -0.18 |
| H37Rv_KO_MarP | 0.365 | 0.368 |
| hypoxia_3wks | -0.786 | -0.112 |
| hypoxia_6wks | -0.393 | -0.535 |
| glycerol | 0.584 | 0.532 |
| cholesterol | -0.992 | 0.446 |
| AJ | 0.41 | 0.765 |
| Bibs02 | -0.021 | 0.009 |
| Bibs02c | 0.441 | -0.656 |
| BL6 | -0.913 | -0.238 |
| BL6a | -0.131 | -0.331 |
| BXD01 | 0.497 | -0.119 |
| BXD010 | -0.524 | -0.076 |
| BXD011 | -0.83 | 0.106 |
| BXD03 | -0.159 | 0.207 |
| BXD04 | 0.949 | 0.058 |
| BXD05 | -0.335 | 0.414 |
| BXD06 | -0.294 | 0.387 |
| BXD07 | -0.497 | -0.097 |
| BXD08 | -0.715 | 0.05 |
| BXD09 | -0.663 | -0.062 |
| CAST | -0.864 | 0.322 |
| CCcont | -0.372 | -0.276 |
| DS01 | -0.293 | -0.477 |
| DS02 | -0.038 | 0.221 |
| DS04 | -0.082 | -0.646 |
| DS0c | 0.811 | 0.489 |
| GP01 | 0.25 | 0.527 |
| GP02 | 0.127 | 0.28 |
| GP0c | -0.25 | 0.068 |
| NOD | -0.415 | 0.042 |
| NZO | -0.497 | 0.549 |
| PWK | -0.217 | 0.517 |
| H37Rv_KO_CtpC | -0.873 | 0.207 |
| H37Rv_KO_CtpD | 0.701 | -0.05 |
| H37Rv_KO_Rv1272 | 1.622 | 0.588 |
| H37Rv_KO_SugABC | 1.681 | 0.512 |
| H37Rv_KO_MbtN | 0.307 | 0.24 |
| Trans05 | -0.924 | 0.793 |
| macrophage_unactivated | -0.133 | -0.429 |
| IL1 | -0.955 | -0.35 |
| Rapamycin | 0.979 | 0.147 |
| Tcell | 0.508 | -0.081 |
| GMCSF | -0.264 | -0.312 |
| IFNab | -1.185 | 0.239 |
| IFNg | -0.954 | -0.155 |
| IFNg_GMCSF1 | 0.129 | 0.176 |
| Rv1432_day32 | -0.395 | 0.186 |
| Rv1565c_day32 | -0.406 | 0.39 |
| secA2_input | 0.697 | 0.564 |
| delta_Rv3594 | -0.214 | -0.509 |
| delta_Rv3717 | 0.196 | -0.352 |
| delta_Rv3811 | -0.036 | -0.495 |
| delta_Rv0954 | -0.062 | -0.351 |
| PonA1 | 0.305 | -0.163 |
| EccD1_KO | -0.648 | 0.023 |
| EspI_KO | -1.871 | -0.522 |
| PE35_KO | -1.018 | -0.292 |
| PPE68_KO | -2.48 | -0.659 |
| glycerol2 | -0.102 | 0.423 |
| lignocerate | -0.247 | 0.66 |
| oleate | 0.05 | 0.461 |
| phosphatidylcholine | -0.137 | 0.391 |
| acetate | -0.304 | 0.632 |
| glucAc | -0.85 | 0.381 |
| Rv0950ko | -0.859 | 0.286 |
| Rv1096ko | 0.642 | 0.531 |
| Rv3684ko | -0.458 | 0.311 |
| delta_otsA_trehalose | 0.221 | 1.165 |