Top 10 genes with highest correlation to Rv3199c/nudC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1533/- | (cc=0.4843) | info on Rv1533/- |
| Rv3787c/- | (cc=0.4667) | info on Rv3787c/- |
| Rv0701/rplC | (cc=0.4364) | info on Rv0701/rplC |
| Rv1726/- | (cc=0.4303) | info on Rv1726/- |
| Rv0342/iniA | (cc=0.4279) | info on Rv0342/iniA |
| Rv0968/- | (cc=0.4104) | info on Rv0968/- |
| Rv2164c/- | (cc=0.4031) | info on Rv2164c/- |
| Rv2719c/- | (cc=0.3943) | info on Rv2719c/- |
| Rv0145/- | (cc=0.3907) | info on Rv0145/- |
| Rv0588/yrbE2B | (cc=0.3858) | info on Rv0588/yrbE2B |
Correlation of Rv3199c/nudC with Rv0588/yrbE2B
Normalized LFCs for Rv3199c/nudC:
(description and provenance of datasets)
| Rv3199c/nudC | Rv0588/yrbE2B | |
| Fe_supp_jason_reseq | -0.95 | -0.254 |
| low_pH_jason_reseq | -0.795 | -0.761 |
| NO_jason_reseq | -0.47 | -0.137 |
| B6_jason_reseq | 0.17 | -0.85 |
| MHCII_jason_reseq | -1.222 | -0.215 |
| Isoniazid02 | -1.491 | -1.806 |
| Rifampicin4 | 0.682 | -0.127 |
| Ethambutol3 | -1.409 | -1.677 |
| Meropenem3 | -1.422 | -1.681 |
| Vancomycin16 | -0.57 | -0.639 |
| Rv2680_day32 | -0.374 | 1.112 |
| H37Rv_KO_MarP | 0.365 | 0.102 |
| hypoxia_3wks | -0.786 | -0.399 |
| hypoxia_6wks | -0.393 | -0.209 |
| glycerol | 0.584 | -0.645 |
| cholesterol | -0.992 | -0.574 |
| AJ | 0.41 | 0.822 |
| Bibs02 | -0.021 | 0.894 |
| Bibs02c | 0.441 | -0.617 |
| BL6 | -0.913 | 0.894 |
| BL6a | -0.131 | 0.512 |
| BXD01 | 0.497 | 0.738 |
| BXD010 | -0.524 | 0.843 |
| BXD011 | -0.83 | 1.88 |
| BXD03 | -0.159 | -0.272 |
| BXD04 | 0.949 | 1.036 |
| BXD05 | -0.335 | 0.348 |
| BXD06 | -0.294 | 1.015 |
| BXD07 | -0.497 | 0.595 |
| BXD08 | -0.715 | 0.753 |
| BXD09 | -0.663 | 0.81 |
| CAST | -0.864 | 0.202 |
| CCcont | -0.372 | 0.73 |
| DS01 | -0.293 | -0.755 |
| DS02 | -0.038 | -0.748 |
| DS04 | -0.082 | 0.07 |
| DS0c | 0.811 | -0.165 |
| GP01 | 0.25 | 0.882 |
| GP02 | 0.127 | -0.047 |
| GP0c | -0.25 | 0.24 |
| NOD | -0.415 | -0.042 |
| NZO | -0.497 | 0.306 |
| PWK | -0.217 | -0.578 |
| H37Rv_KO_CtpC | -0.873 | 0.348 |
| H37Rv_KO_CtpD | 0.701 | 1.415 |
| H37Rv_KO_Rv1272 | 1.622 | 1.169 |
| H37Rv_KO_SugABC | 1.681 | 0.45 |
| H37Rv_KO_MbtN | 0.307 | -0.656 |
| Trans05 | -0.924 | 0.093 |
| macrophage_unactivated | -0.133 | -0.057 |
| IL1 | -0.955 | 0.05 |
| Rapamycin | 0.979 | -0.055 |
| Tcell | 0.508 | 0.541 |
| GMCSF | -0.264 | 0.396 |
| IFNab | -1.185 | 0.051 |
| IFNg | -0.954 | 0.315 |
| IFNg_GMCSF1 | 0.129 | -0.654 |
| Rv1432_day32 | -0.395 | 0.169 |
| Rv1565c_day32 | -0.406 | 0.621 |
| secA2_input | 0.697 | 0.25 |
| delta_Rv3594 | -0.214 | 0.132 |
| delta_Rv3717 | 0.196 | 0.541 |
| delta_Rv3811 | -0.036 | 0.913 |
| delta_Rv0954 | -0.062 | 0.842 |
| PonA1 | 0.305 | 0.546 |
| EccD1_KO | -0.648 | -0.635 |
| EspI_KO | -1.871 | -0.927 |
| PE35_KO | -1.018 | -2.042 |
| PPE68_KO | -2.48 | -1.699 |
| glycerol2 | -0.102 | -0.029 |
| lignocerate | -0.247 | 0.421 |
| oleate | 0.05 | 0.274 |
| phosphatidylcholine | -0.137 | 0.112 |
| acetate | -0.304 | 0.0 |
| glucAc | -0.85 | 0.042 |
| Rv0950ko | -0.859 | 1.984 |
| Rv1096ko | 0.642 | 2.844 |
| Rv3684ko | -0.458 | 1.503 |
| delta_otsA_trehalose | 0.221 | -0.55 |