Top 10 genes with highest correlation to Rv3199c/nudC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1533/- | (cc=0.4843) | info on Rv1533/- |
| Rv3787c/- | (cc=0.4667) | info on Rv3787c/- |
| Rv0701/rplC | (cc=0.4364) | info on Rv0701/rplC |
| Rv1726/- | (cc=0.4303) | info on Rv1726/- |
| Rv0342/iniA | (cc=0.4279) | info on Rv0342/iniA |
| Rv0968/- | (cc=0.4104) | info on Rv0968/- |
| Rv2164c/- | (cc=0.4031) | info on Rv2164c/- |
| Rv2719c/- | (cc=0.3943) | info on Rv2719c/- |
| Rv0145/- | (cc=0.3907) | info on Rv0145/- |
| Rv0588/yrbE2B | (cc=0.3858) | info on Rv0588/yrbE2B |
Correlation of Rv3199c/nudC with Rv0968/-
Normalized LFCs for Rv3199c/nudC:
(description and provenance of datasets)
| Rv3199c/nudC | Rv0968/- | |
| Fe_supp_jason_reseq | -0.95 | 0.704 |
| low_pH_jason_reseq | -0.795 | -0.738 |
| NO_jason_reseq | -0.47 | 0.423 |
| B6_jason_reseq | 0.17 | 0.01 |
| MHCII_jason_reseq | -1.222 | 0.27 |
| Isoniazid02 | -1.491 | -3.296 |
| Rifampicin4 | 0.682 | 0.831 |
| Ethambutol3 | -1.409 | -2.914 |
| Meropenem3 | -1.422 | -3.018 |
| Vancomycin16 | -0.57 | -1.112 |
| Rv2680_day32 | -0.374 | 0.91 |
| H37Rv_KO_MarP | 0.365 | 0.883 |
| hypoxia_3wks | -0.786 | -0.203 |
| hypoxia_6wks | -0.393 | -1.349 |
| glycerol | 0.584 | 0.677 |
| cholesterol | -0.992 | 0.845 |
| AJ | 0.41 | 0.528 |
| Bibs02 | -0.021 | -0.278 |
| Bibs02c | 0.441 | 0.671 |
| BL6 | -0.913 | -0.789 |
| BL6a | -0.131 | -0.393 |
| BXD01 | 0.497 | -0.379 |
| BXD010 | -0.524 | -0.019 |
| BXD011 | -0.83 | -0.923 |
| BXD03 | -0.159 | -0.794 |
| BXD04 | 0.949 | -0.426 |
| BXD05 | -0.335 | 0.48 |
| BXD06 | -0.294 | -0.954 |
| BXD07 | -0.497 | -0.699 |
| BXD08 | -0.715 | -0.379 |
| BXD09 | -0.663 | -0.542 |
| CAST | -0.864 | 0.265 |
| CCcont | -0.372 | -0.929 |
| DS01 | -0.293 | -0.469 |
| DS02 | -0.038 | 0.635 |
| DS04 | -0.082 | 0.093 |
| DS0c | 0.811 | -0.211 |
| GP01 | 0.25 | 0.345 |
| GP02 | 0.127 | -0.744 |
| GP0c | -0.25 | -0.329 |
| NOD | -0.415 | 0.885 |
| NZO | -0.497 | -0.27 |
| PWK | -0.217 | -0.254 |
| H37Rv_KO_CtpC | -0.873 | -0.14 |
| H37Rv_KO_CtpD | 0.701 | 1.622 |
| H37Rv_KO_Rv1272 | 1.622 | 1.062 |
| H37Rv_KO_SugABC | 1.681 | 0.86 |
| H37Rv_KO_MbtN | 0.307 | -1.047 |
| Trans05 | -0.924 | -0.921 |
| macrophage_unactivated | -0.133 | -0.843 |
| IL1 | -0.955 | -0.946 |
| Rapamycin | 0.979 | -1.105 |
| Tcell | 0.508 | -0.472 |
| GMCSF | -0.264 | -0.055 |
| IFNab | -1.185 | -0.13 |
| IFNg | -0.954 | -0.516 |
| IFNg_GMCSF1 | 0.129 | -0.569 |
| Rv1432_day32 | -0.395 | -0.215 |
| Rv1565c_day32 | -0.406 | 0.445 |
| secA2_input | 0.697 | 1.842 |
| delta_Rv3594 | -0.214 | 0.096 |
| delta_Rv3717 | 0.196 | -0.593 |
| delta_Rv3811 | -0.036 | -0.167 |
| delta_Rv0954 | -0.062 | -0.105 |
| PonA1 | 0.305 | 1.324 |
| EccD1_KO | -0.648 | 1.237 |
| EspI_KO | -1.871 | -0.074 |
| PE35_KO | -1.018 | 0.111 |
| PPE68_KO | -2.48 | -0.192 |
| glycerol2 | -0.102 | 0.146 |
| lignocerate | -0.247 | 0.072 |
| oleate | 0.05 | 0.18 |
| phosphatidylcholine | -0.137 | 0.326 |
| acetate | -0.304 | 0.352 |
| glucAc | -0.85 | 0.061 |
| Rv0950ko | -0.859 | 0.458 |
| Rv1096ko | 0.642 | 1.2 |
| Rv3684ko | -0.458 | 0.652 |
| delta_otsA_trehalose | 0.221 | 1.843 |