Top 10 genes with highest correlation to Rv3126c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1505c/- | (cc=0.59) | info on Rv1505c/- |
| Rv3300c/- | (cc=0.5772) | info on Rv3300c/- |
| Rv0371c/- | (cc=0.5649) | info on Rv0371c/- |
| Rv1430/PE16 | (cc=0.5634) | info on Rv1430/PE16 |
| Rv3153/nuoI | (cc=0.546) | info on Rv3153/nuoI |
| Rv0188/- | (cc=0.5456) | info on Rv0188/- |
| Rv1831/- | (cc=0.5395) | info on Rv1831/- |
| Rv2500c/fadE19 | (cc=0.5366) | info on Rv2500c/fadE19 |
| Rv2428/ahpC | (cc=0.5361) | info on Rv2428/ahpC |
| Rv1116/- | (cc=0.5355) | info on Rv1116/- |
Correlation of Rv3126c/- with Rv2428/ahpC
Normalized LFCs for Rv3126c/-:
(description and provenance of datasets)
| Rv3126c/- | Rv2428/ahpC | |
| Fe_supp_jason_reseq | -1.953 | 1.287 |
| low_pH_jason_reseq | -0.397 | 0.294 |
| NO_jason_reseq | -1.205 | -0.446 |
| B6_jason_reseq | -1.911 | -1.052 |
| MHCII_jason_reseq | -1.426 | 0.076 |
| Isoniazid02 | -0.506 | -3.048 |
| Rifampicin4 | 0.758 | -1.151 |
| Ethambutol3 | 0.179 | -0.327 |
| Meropenem3 | 0.0 | 1.373 |
| Vancomycin16 | 0.512 | 0.313 |
| Rv2680_day32 | -0.131 | 0.672 |
| H37Rv_KO_MarP | -0.207 | 0.543 |
| hypoxia_3wks | 1.017 | 0.096 |
| hypoxia_6wks | 0.677 | -0.489 |
| glycerol | -0.554 | 0.385 |
| cholesterol | -0.398 | -0.338 |
| AJ | -0.637 | 1.062 |
| Bibs02 | -0.319 | -1.142 |
| Bibs02c | -0.365 | 0.574 |
| BL6 | 2.573 | 1.637 |
| BL6a | 3.655 | 1.769 |
| BXD01 | 2.127 | 2.135 |
| BXD010 | 2.796 | 1.577 |
| BXD011 | 1.711 | 1.795 |
| BXD03 | 2.925 | 1.146 |
| BXD04 | 0.992 | 0.434 |
| BXD05 | 2.388 | 1.762 |
| BXD06 | 3.202 | 1.806 |
| BXD07 | 2.751 | 2.663 |
| BXD08 | 3.313 | 1.8 |
| BXD09 | 3.562 | 2.193 |
| CAST | 2.518 | 1.278 |
| CCcont | 2.334 | 2.416 |
| DS01 | -0.648 | -0.26 |
| DS02 | 0.61 | 1.459 |
| DS04 | -0.533 | -0.104 |
| DS0c | -0.596 | 2.077 |
| GP01 | -0.271 | 2.67 |
| GP02 | -0.228 | 0.194 |
| GP0c | -0.357 | 1.849 |
| NOD | 3.705 | 5.586 |
| NZO | -0.548 | -0.465 |
| PWK | -0.539 | 0.458 |
| H37Rv_KO_CtpC | -0.446 | 1.09 |
| H37Rv_KO_CtpD | -0.221 | 1.363 |
| H37Rv_KO_Rv1272 | 1.328 | 3.401 |
| H37Rv_KO_SugABC | -0.272 | 0.189 |
| H37Rv_KO_MbtN | -0.18 | 0.24 |
| Trans05 | -0.109 | 0.725 |
| macrophage_unactivated | 1.001 | 0.139 |
| IL1 | -0.664 | -1.67 |
| Rapamycin | 0.819 | 0.921 |
| Tcell | 0.736 | -0.072 |
| GMCSF | 0.399 | -0.37 |
| IFNab | -0.151 | -0.136 |
| IFNg | -0.27 | 0.118 |
| IFNg_GMCSF1 | 1.059 | -0.361 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 1.475 |
| secA2_input | -1.781 | 1.14 |
| delta_Rv3594 | -3.114 | -0.239 |
| delta_Rv3717 | -0.629 | 0.135 |
| delta_Rv3811 | -0.977 | -0.113 |
| delta_Rv0954 | 0.83 | -0.176 |
| PonA1 | -0.127 | -0.157 |
| EccD1_KO | 3.762 | 1.924 |
| EspI_KO | 0.605 | 3.645 |
| PE35_KO | 1.479 | 2.415 |
| PPE68_KO | 2.259 | 2.451 |
| glycerol2 | 0.029 | -0.65 |
| lignocerate | -0.739 | -0.807 |
| oleate | 1.014 | -0.438 |
| phosphatidylcholine | 0.333 | -0.716 |
| acetate | -0.224 | 1.426 |
| glucAc | -2.282 | -0.352 |
| Rv0950ko | -0.347 | -0.112 |
| Rv1096ko | -0.597 | 0.525 |
| Rv3684ko | 1.172 | -0.933 |
| delta_otsA_trehalose | 0.0 | -2.215 |