Top 10 genes with highest correlation to Rv3126c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1505c/- | (cc=0.59) | info on Rv1505c/- |
| Rv3300c/- | (cc=0.5772) | info on Rv3300c/- |
| Rv0371c/- | (cc=0.5649) | info on Rv0371c/- |
| Rv1430/PE16 | (cc=0.5634) | info on Rv1430/PE16 |
| Rv3153/nuoI | (cc=0.546) | info on Rv3153/nuoI |
| Rv0188/- | (cc=0.5456) | info on Rv0188/- |
| Rv1831/- | (cc=0.5395) | info on Rv1831/- |
| Rv2500c/fadE19 | (cc=0.5366) | info on Rv2500c/fadE19 |
| Rv2428/ahpC | (cc=0.5361) | info on Rv2428/ahpC |
| Rv1116/- | (cc=0.5355) | info on Rv1116/- |
Correlation of Rv3126c/- with Rv1505c/-
Normalized LFCs for Rv3126c/-:
(description and provenance of datasets)
| Rv3126c/- | Rv1505c/- | |
| Fe_supp_jason_reseq | -1.953 | 0.398 |
| low_pH_jason_reseq | -0.397 | -0.35 |
| NO_jason_reseq | -1.205 | 0.247 |
| B6_jason_reseq | -1.911 | -1.795 |
| MHCII_jason_reseq | -1.426 | -1.356 |
| Isoniazid02 | -0.506 | 1.695 |
| Rifampicin4 | 0.758 | -0.244 |
| Ethambutol3 | 0.179 | 0.896 |
| Meropenem3 | 0.0 | -0.284 |
| Vancomycin16 | 0.512 | 0.0 |
| Rv2680_day32 | -0.131 | -0.332 |
| H37Rv_KO_MarP | -0.207 | -0.579 |
| hypoxia_3wks | 1.017 | -0.144 |
| hypoxia_6wks | 0.677 | 0.0 |
| glycerol | -0.554 | -0.396 |
| cholesterol | -0.398 | -0.847 |
| AJ | -0.637 | -0.071 |
| Bibs02 | -0.319 | 0.604 |
| Bibs02c | -0.365 | -0.567 |
| BL6 | 2.573 | 1.544 |
| BL6a | 3.655 | 1.908 |
| BXD01 | 2.127 | 1.315 |
| BXD010 | 2.796 | 1.351 |
| BXD011 | 1.711 | 1.424 |
| BXD03 | 2.925 | 1.73 |
| BXD04 | 0.992 | 1.686 |
| BXD05 | 2.388 | 1.878 |
| BXD06 | 3.202 | 2.076 |
| BXD07 | 2.751 | 1.562 |
| BXD08 | 3.313 | 1.373 |
| BXD09 | 3.562 | 2.422 |
| CAST | 2.518 | 0.709 |
| CCcont | 2.334 | 1.366 |
| DS01 | -0.648 | 0.204 |
| DS02 | 0.61 | -1.511 |
| DS04 | -0.533 | 0.641 |
| DS0c | -0.596 | -0.506 |
| GP01 | -0.271 | 0.539 |
| GP02 | -0.228 | 0.938 |
| GP0c | -0.357 | 0.511 |
| NOD | 3.705 | 2.294 |
| NZO | -0.548 | -0.786 |
| PWK | -0.539 | 0.274 |
| H37Rv_KO_CtpC | -0.446 | 1.294 |
| H37Rv_KO_CtpD | -0.221 | 2.274 |
| H37Rv_KO_Rv1272 | 1.328 | 1.29 |
| H37Rv_KO_SugABC | -0.272 | -0.748 |
| H37Rv_KO_MbtN | -0.18 | 1.363 |
| Trans05 | -0.109 | 1.179 |
| macrophage_unactivated | 1.001 | 0.167 |
| IL1 | -0.664 | 0.489 |
| Rapamycin | 0.819 | 0.203 |
| Tcell | 0.736 | 0.73 |
| GMCSF | 0.399 | -0.219 |
| IFNab | -0.151 | 0.16 |
| IFNg | -0.27 | -0.072 |
| IFNg_GMCSF1 | 1.059 | 0.167 |
| Rv1432_day32 | 0.0 | 0.288 |
| Rv1565c_day32 | 0.0 | -0.292 |
| secA2_input | -1.781 | -1.018 |
| delta_Rv3594 | -3.114 | 0.197 |
| delta_Rv3717 | -0.629 | -0.56 |
| delta_Rv3811 | -0.977 | 0.223 |
| delta_Rv0954 | 0.83 | 0.656 |
| PonA1 | -0.127 | -0.164 |
| EccD1_KO | 3.762 | 0.059 |
| EspI_KO | 0.605 | -0.163 |
| PE35_KO | 1.479 | -0.055 |
| PPE68_KO | 2.259 | -0.368 |
| glycerol2 | 0.029 | -0.488 |
| lignocerate | -0.739 | -0.477 |
| oleate | 1.014 | -0.432 |
| phosphatidylcholine | 0.333 | -0.098 |
| acetate | -0.224 | -0.848 |
| glucAc | -2.282 | -1.106 |
| Rv0950ko | -0.347 | 0.6 |
| Rv1096ko | -0.597 | -0.525 |
| Rv3684ko | 1.172 | 0.311 |
| delta_otsA_trehalose | 0.0 | 1.395 |