Top 10 genes with highest correlation to Rv3126c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1505c/- | (cc=0.59) | info on Rv1505c/- |
| Rv3300c/- | (cc=0.5772) | info on Rv3300c/- |
| Rv0371c/- | (cc=0.5649) | info on Rv0371c/- |
| Rv1430/PE16 | (cc=0.5634) | info on Rv1430/PE16 |
| Rv3153/nuoI | (cc=0.546) | info on Rv3153/nuoI |
| Rv0188/- | (cc=0.5456) | info on Rv0188/- |
| Rv1831/- | (cc=0.5395) | info on Rv1831/- |
| Rv2500c/fadE19 | (cc=0.5366) | info on Rv2500c/fadE19 |
| Rv2428/ahpC | (cc=0.5361) | info on Rv2428/ahpC |
| Rv1116/- | (cc=0.5355) | info on Rv1116/- |
Correlation of Rv3126c/- with Rv1116/-
Normalized LFCs for Rv3126c/-:
(description and provenance of datasets)
| Rv3126c/- | Rv1116/- | |
| Fe_supp_jason_reseq | -1.953 | -0.079 |
| low_pH_jason_reseq | -0.397 | 1.563 |
| NO_jason_reseq | -1.205 | -0.937 |
| B6_jason_reseq | -1.911 | -0.775 |
| MHCII_jason_reseq | -1.426 | -2.185 |
| Isoniazid02 | -0.506 | -0.202 |
| Rifampicin4 | 0.758 | -0.793 |
| Ethambutol3 | 0.179 | -0.469 |
| Meropenem3 | 0.0 | -0.329 |
| Vancomycin16 | 0.512 | -0.544 |
| Rv2680_day32 | -0.131 | -3.002 |
| H37Rv_KO_MarP | -0.207 | 0.209 |
| hypoxia_3wks | 1.017 | 0.881 |
| hypoxia_6wks | 0.677 | 0.315 |
| glycerol | -0.554 | -2.319 |
| cholesterol | -0.398 | -1.265 |
| AJ | -0.637 | -0.866 |
| Bibs02 | -0.319 | -0.507 |
| Bibs02c | -0.365 | 1.479 |
| BL6 | 2.573 | 1.089 |
| BL6a | 3.655 | 3.068 |
| BXD01 | 2.127 | 1.975 |
| BXD010 | 2.796 | 3.315 |
| BXD011 | 1.711 | 2.491 |
| BXD03 | 2.925 | 2.737 |
| BXD04 | 0.992 | 2.569 |
| BXD05 | 2.388 | 2.73 |
| BXD06 | 3.202 | 2.452 |
| BXD07 | 2.751 | 2.972 |
| BXD08 | 3.313 | 2.685 |
| BXD09 | 3.562 | 2.084 |
| CAST | 2.518 | -0.859 |
| CCcont | 2.334 | 1.588 |
| DS01 | -0.648 | -0.352 |
| DS02 | 0.61 | -2.497 |
| DS04 | -0.533 | -1.405 |
| DS0c | -0.596 | -1.425 |
| GP01 | -0.271 | 2.097 |
| GP02 | -0.228 | -0.353 |
| GP0c | -0.357 | 2.178 |
| NOD | 3.705 | -0.623 |
| NZO | -0.548 | -2.29 |
| PWK | -0.539 | -1.563 |
| H37Rv_KO_CtpC | -0.446 | 3.593 |
| H37Rv_KO_CtpD | -0.221 | 1.121 |
| H37Rv_KO_Rv1272 | 1.328 | 1.482 |
| H37Rv_KO_SugABC | -0.272 | -0.321 |
| H37Rv_KO_MbtN | -0.18 | 1.349 |
| Trans05 | -0.109 | 1.761 |
| macrophage_unactivated | 1.001 | -1.727 |
| IL1 | -0.664 | -1.216 |
| Rapamycin | 0.819 | -0.414 |
| Tcell | 0.736 | -1.606 |
| GMCSF | 0.399 | -0.38 |
| IFNab | -0.151 | -0.46 |
| IFNg | -0.27 | -1.646 |
| IFNg_GMCSF1 | 1.059 | -0.723 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | -0.622 |
| secA2_input | -1.781 | 0.092 |
| delta_Rv3594 | -3.114 | -2.284 |
| delta_Rv3717 | -0.629 | -0.364 |
| delta_Rv3811 | -0.977 | 0.213 |
| delta_Rv0954 | 0.83 | -1.87 |
| PonA1 | -0.127 | -3.333 |
| EccD1_KO | 3.762 | 0.51 |
| EspI_KO | 0.605 | 1.934 |
| PE35_KO | 1.479 | 0.796 |
| PPE68_KO | 2.259 | 1.523 |
| glycerol2 | 0.029 | -1.516 |
| lignocerate | -0.739 | -1.445 |
| oleate | 1.014 | -0.045 |
| phosphatidylcholine | 0.333 | -0.403 |
| acetate | -0.224 | -1.837 |
| glucAc | -2.282 | -2.853 |
| Rv0950ko | -0.347 | 1.263 |
| Rv1096ko | -0.597 | 0.989 |
| Rv3684ko | 1.172 | 0.095 |
| delta_otsA_trehalose | 0.0 | 0.483 |