Top 10 genes with highest correlation to Rv3126c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1505c/- | (cc=0.59) | info on Rv1505c/- |
| Rv3300c/- | (cc=0.5772) | info on Rv3300c/- |
| Rv0371c/- | (cc=0.5649) | info on Rv0371c/- |
| Rv1430/PE16 | (cc=0.5634) | info on Rv1430/PE16 |
| Rv3153/nuoI | (cc=0.546) | info on Rv3153/nuoI |
| Rv0188/- | (cc=0.5456) | info on Rv0188/- |
| Rv1831/- | (cc=0.5395) | info on Rv1831/- |
| Rv2500c/fadE19 | (cc=0.5366) | info on Rv2500c/fadE19 |
| Rv2428/ahpC | (cc=0.5361) | info on Rv2428/ahpC |
| Rv1116/- | (cc=0.5355) | info on Rv1116/- |
Correlation of Rv3126c/- with Rv0371c/-
Normalized LFCs for Rv3126c/-:
(description and provenance of datasets)
| Rv3126c/- | Rv0371c/- | |
| Fe_supp_jason_reseq | -1.953 | -0.439 |
| low_pH_jason_reseq | -0.397 | -0.776 |
| NO_jason_reseq | -1.205 | -0.614 |
| B6_jason_reseq | -1.911 | -1.467 |
| MHCII_jason_reseq | -1.426 | -1.383 |
| Isoniazid02 | -0.506 | 0.201 |
| Rifampicin4 | 0.758 | 0.0 |
| Ethambutol3 | 0.179 | 0.0 |
| Meropenem3 | 0.0 | 0.0 |
| Vancomycin16 | 0.512 | 0.366 |
| Rv2680_day32 | -0.131 | -0.363 |
| H37Rv_KO_MarP | -0.207 | 0.0 |
| hypoxia_3wks | 1.017 | 0.335 |
| hypoxia_6wks | 0.677 | -0.317 |
| glycerol | -0.554 | 0.385 |
| cholesterol | -0.398 | -0.216 |
| AJ | -0.637 | 1.334 |
| Bibs02 | -0.319 | -0.775 |
| Bibs02c | -0.365 | 1.914 |
| BL6 | 2.573 | 4.166 |
| BL6a | 3.655 | 2.574 |
| BXD01 | 2.127 | 2.329 |
| BXD010 | 2.796 | 3.1 |
| BXD011 | 1.711 | 2.844 |
| BXD03 | 2.925 | 2.737 |
| BXD04 | 0.992 | 1.656 |
| BXD05 | 2.388 | 1.852 |
| BXD06 | 3.202 | 1.957 |
| BXD07 | 2.751 | 2.64 |
| BXD08 | 3.313 | 1.702 |
| BXD09 | 3.562 | 2.582 |
| CAST | 2.518 | 2.478 |
| CCcont | 2.334 | 1.97 |
| DS01 | -0.648 | 1.627 |
| DS02 | 0.61 | 0.972 |
| DS04 | -0.533 | -0.628 |
| DS0c | -0.596 | 0.869 |
| GP01 | -0.271 | 0.067 |
| GP02 | -0.228 | 2.203 |
| GP0c | -0.357 | 1.861 |
| NOD | 3.705 | 4.59 |
| NZO | -0.548 | 0.6 |
| PWK | -0.539 | -0.142 |
| H37Rv_KO_CtpC | -0.446 | 0.309 |
| H37Rv_KO_CtpD | -0.221 | 0.0 |
| H37Rv_KO_Rv1272 | 1.328 | 0.811 |
| H37Rv_KO_SugABC | -0.272 | -0.321 |
| H37Rv_KO_MbtN | -0.18 | 2.275 |
| Trans05 | -0.109 | 0.459 |
| macrophage_unactivated | 1.001 | 0.227 |
| IL1 | -0.664 | 0.214 |
| Rapamycin | 0.819 | 0.512 |
| Tcell | 0.736 | 0.326 |
| GMCSF | 0.399 | 0.895 |
| IFNab | -0.151 | 0.302 |
| IFNg | -0.27 | -0.243 |
| IFNg_GMCSF1 | 1.059 | -0.591 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | -1.781 | -0.47 |
| delta_Rv3594 | -3.114 | -0.572 |
| delta_Rv3717 | -0.629 | 0.287 |
| delta_Rv3811 | -0.977 | -1.096 |
| delta_Rv0954 | 0.83 | -2.335 |
| PonA1 | -0.127 | -1.928 |
| EccD1_KO | 3.762 | -0.898 |
| EspI_KO | 0.605 | -0.451 |
| PE35_KO | 1.479 | -0.3 |
| PPE68_KO | 2.259 | -0.163 |
| glycerol2 | 0.029 | -0.97 |
| lignocerate | -0.739 | 0.0 |
| oleate | 1.014 | -2.741 |
| phosphatidylcholine | 0.333 | -1.307 |
| acetate | -0.224 | 0.0 |
| glucAc | -2.282 | 0.0 |
| Rv0950ko | -0.347 | -1.122 |
| Rv1096ko | -0.597 | 0.38 |
| Rv3684ko | 1.172 | -0.452 |
| delta_otsA_trehalose | 0.0 | 0.0 |