Top 10 genes with highest correlation to Rv3073c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3242c/- | (cc=0.5807) | info on Rv3242c/- |
| Rv0325/- | (cc=0.5309) | info on Rv0325/- |
| Rv0139/- | (cc=0.4989) | info on Rv0139/- |
| Rv1940/ribA1 | (cc=0.4924) | info on Rv1940/ribA1 |
| Rv1789/PPE26 | (cc=0.4847) | info on Rv1789/PPE26 |
| Rv3450c/eccB4 | (cc=0.4754) | info on Rv3450c/eccB4 |
| Rv1064c/lpqV | (cc=0.4739) | info on Rv1064c/lpqV |
| Rv0386/- | (cc=0.4737) | info on Rv0386/- |
| Rv3060c/- | (cc=0.4718) | info on Rv3060c/- |
| Rv1736c/narX | (cc=0.469) | info on Rv1736c/narX |
Correlation of Rv3073c/- with Rv3450c/eccB4
Normalized LFCs for Rv3073c/-:
(description and provenance of datasets)
| Rv3073c/- | Rv3450c/eccB4 | |
| Fe_supp_jason_reseq | -1.754 | -0.294 |
| low_pH_jason_reseq | -0.87 | -0.761 |
| NO_jason_reseq | 0.643 | -0.572 |
| B6_jason_reseq | 0.322 | 0.09 |
| MHCII_jason_reseq | -1.012 | 0.893 |
| Isoniazid02 | -0.223 | 1.145 |
| Rifampicin4 | 0.536 | 1.099 |
| Ethambutol3 | 4.925 | 1.439 |
| Meropenem3 | 0.152 | -0.364 |
| Vancomycin16 | 0.239 | 0.077 |
| Rv2680_day32 | -0.119 | 2.022 |
| H37Rv_KO_MarP | -0.093 | 0.628 |
| hypoxia_3wks | -1.447 | 0.128 |
| hypoxia_6wks | -1.222 | -0.599 |
| glycerol | -0.347 | 0.813 |
| cholesterol | -0.386 | 0.263 |
| AJ | 0.0 | 0.225 |
| Bibs02 | -0.563 | 0.646 |
| Bibs02c | 0.029 | 0.793 |
| BL6 | -1.637 | -0.716 |
| BL6a | -0.528 | 0.64 |
| BXD01 | -2.734 | -0.257 |
| BXD010 | -3.574 | -0.786 |
| BXD011 | -2.55 | -0.567 |
| BXD03 | -3.26 | -0.66 |
| BXD04 | -1.454 | 0.024 |
| BXD05 | -3.59 | -0.31 |
| BXD06 | -2.446 | -0.719 |
| BXD07 | -3.277 | -0.374 |
| BXD08 | -2.127 | -0.231 |
| BXD09 | -1.012 | -0.459 |
| CAST | -0.432 | 0.14 |
| CCcont | -3.036 | -0.191 |
| DS01 | -0.055 | 0.666 |
| DS02 | -1.155 | 0.594 |
| DS04 | -1.001 | 0.422 |
| DS0c | -0.248 | 1.259 |
| GP01 | -1.056 | 0.045 |
| GP02 | 0.438 | 0.06 |
| GP0c | 0.545 | -0.834 |
| NOD | -1.227 | 0.225 |
| NZO | -0.663 | -0.247 |
| PWK | -1.178 | 0.232 |
| H37Rv_KO_CtpC | 0.695 | -0.844 |
| H37Rv_KO_CtpD | -3.62 | -0.035 |
| H37Rv_KO_Rv1272 | -3.682 | -0.76 |
| H37Rv_KO_SugABC | -2.302 | 0.078 |
| H37Rv_KO_MbtN | -2.395 | -0.902 |
| Trans05 | -1.365 | -0.82 |
| macrophage_unactivated | -1.348 | -0.347 |
| IL1 | -0.928 | 0.225 |
| Rapamycin | 0.835 | 0.939 |
| Tcell | -0.358 | -0.44 |
| GMCSF | -0.391 | 0.058 |
| IFNab | 0.822 | 0.659 |
| IFNg | -1.684 | -0.631 |
| IFNg_GMCSF1 | -0.346 | 0.035 |
| Rv1432_day32 | 0.0 | -0.284 |
| Rv1565c_day32 | 0.0 | 0.674 |
| secA2_input | -0.415 | 1.243 |
| delta_Rv3594 | -2.842 | -0.367 |
| delta_Rv3717 | -1.845 | -0.15 |
| delta_Rv3811 | -1.487 | -0.104 |
| delta_Rv0954 | -0.646 | -0.481 |
| PonA1 | 0.461 | 0.305 |
| EccD1_KO | -0.77 | -0.921 |
| EspI_KO | -1.469 | -1.32 |
| PE35_KO | -0.875 | -0.901 |
| PPE68_KO | -2.454 | -1.203 |
| glycerol2 | -1.827 | -0.01 |
| lignocerate | -1.644 | 0.337 |
| oleate | -0.936 | 0.238 |
| phosphatidylcholine | -1.23 | 0.472 |
| acetate | -3.548 | -0.14 |
| glucAc | -2.382 | -0.171 |
| Rv0950ko | 0.103 | -0.109 |
| Rv1096ko | -2.621 | 0.311 |
| Rv3684ko | -1.284 | -0.029 |
| delta_otsA_trehalose | 0.126 | 0.364 |