Top 10 genes with highest correlation to Rv3073c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3242c/- | (cc=0.5807) | info on Rv3242c/- |
| Rv0325/- | (cc=0.5309) | info on Rv0325/- |
| Rv0139/- | (cc=0.4989) | info on Rv0139/- |
| Rv1940/ribA1 | (cc=0.4924) | info on Rv1940/ribA1 |
| Rv1789/PPE26 | (cc=0.4847) | info on Rv1789/PPE26 |
| Rv3450c/eccB4 | (cc=0.4754) | info on Rv3450c/eccB4 |
| Rv1064c/lpqV | (cc=0.4739) | info on Rv1064c/lpqV |
| Rv0386/- | (cc=0.4737) | info on Rv0386/- |
| Rv3060c/- | (cc=0.4718) | info on Rv3060c/- |
| Rv1736c/narX | (cc=0.469) | info on Rv1736c/narX |
Correlation of Rv3073c/- with Rv1064c/lpqV
Normalized LFCs for Rv3073c/-:
(description and provenance of datasets)
| Rv3073c/- | Rv1064c/lpqV | |
| Fe_supp_jason_reseq | -1.754 | 0.546 |
| low_pH_jason_reseq | -0.87 | 0.489 |
| NO_jason_reseq | 0.643 | 0.824 |
| B6_jason_reseq | 0.322 | 0.19 |
| MHCII_jason_reseq | -1.012 | -0.168 |
| Isoniazid02 | -0.223 | 0.022 |
| Rifampicin4 | 0.536 | 1.007 |
| Ethambutol3 | 4.925 | 3.287 |
| Meropenem3 | 0.152 | 0.127 |
| Vancomycin16 | 0.239 | 0.207 |
| Rv2680_day32 | -0.119 | -0.607 |
| H37Rv_KO_MarP | -0.093 | 0.391 |
| hypoxia_3wks | -1.447 | 0.742 |
| hypoxia_6wks | -1.222 | 0.509 |
| glycerol | -0.347 | 1.524 |
| cholesterol | -0.386 | 0.521 |
| AJ | 0.0 | 0.825 |
| Bibs02 | -0.563 | -0.976 |
| Bibs02c | 0.029 | -0.911 |
| BL6 | -1.637 | -1.233 |
| BL6a | -0.528 | -0.984 |
| BXD01 | -2.734 | -0.523 |
| BXD010 | -3.574 | -0.289 |
| BXD011 | -2.55 | -1.294 |
| BXD03 | -3.26 | -0.722 |
| BXD04 | -1.454 | -1.256 |
| BXD05 | -3.59 | -0.68 |
| BXD06 | -2.446 | -1.459 |
| BXD07 | -3.277 | -1.729 |
| BXD08 | -2.127 | -0.039 |
| BXD09 | -1.012 | -0.441 |
| CAST | -0.432 | -0.602 |
| CCcont | -3.036 | -1.732 |
| DS01 | -0.055 | 0.253 |
| DS02 | -1.155 | -0.076 |
| DS04 | -1.001 | -0.453 |
| DS0c | -0.248 | 0.025 |
| GP01 | -1.056 | 0.197 |
| GP02 | 0.438 | -0.74 |
| GP0c | 0.545 | 0.661 |
| NOD | -1.227 | -0.556 |
| NZO | -0.663 | -0.069 |
| PWK | -1.178 | 0.365 |
| H37Rv_KO_CtpC | 0.695 | -0.438 |
| H37Rv_KO_CtpD | -3.62 | -0.54 |
| H37Rv_KO_Rv1272 | -3.682 | -0.74 |
| H37Rv_KO_SugABC | -2.302 | 0.504 |
| H37Rv_KO_MbtN | -2.395 | 0.084 |
| Trans05 | -1.365 | 1.62 |
| macrophage_unactivated | -1.348 | 0.748 |
| IL1 | -0.928 | -1.264 |
| Rapamycin | 0.835 | 0.519 |
| Tcell | -0.358 | 0.316 |
| GMCSF | -0.391 | -0.341 |
| IFNab | 0.822 | -0.242 |
| IFNg | -1.684 | -0.943 |
| IFNg_GMCSF1 | -0.346 | 0.371 |
| Rv1432_day32 | 0.0 | -0.365 |
| Rv1565c_day32 | 0.0 | 0.081 |
| secA2_input | -0.415 | 0.346 |
| delta_Rv3594 | -2.842 | 0.219 |
| delta_Rv3717 | -1.845 | 0.208 |
| delta_Rv3811 | -1.487 | 0.535 |
| delta_Rv0954 | -0.646 | 0.37 |
| PonA1 | 0.461 | -0.401 |
| EccD1_KO | -0.77 | 1.414 |
| EspI_KO | -1.469 | 2.005 |
| PE35_KO | -0.875 | 1.175 |
| PPE68_KO | -2.454 | 0.672 |
| glycerol2 | -1.827 | -0.172 |
| lignocerate | -1.644 | -0.921 |
| oleate | -0.936 | 0.861 |
| phosphatidylcholine | -1.23 | 0.679 |
| acetate | -3.548 | -1.205 |
| glucAc | -2.382 | -2.666 |
| Rv0950ko | 0.103 | 0.142 |
| Rv1096ko | -2.621 | 0.48 |
| Rv3684ko | -1.284 | 0.707 |
| delta_otsA_trehalose | 0.126 | 0.341 |