Top 10 genes with highest correlation to Rv3073c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3242c/- | (cc=0.5807) | info on Rv3242c/- |
| Rv0325/- | (cc=0.5309) | info on Rv0325/- |
| Rv0139/- | (cc=0.4989) | info on Rv0139/- |
| Rv1940/ribA1 | (cc=0.4924) | info on Rv1940/ribA1 |
| Rv1789/PPE26 | (cc=0.4847) | info on Rv1789/PPE26 |
| Rv3450c/eccB4 | (cc=0.4754) | info on Rv3450c/eccB4 |
| Rv1064c/lpqV | (cc=0.4739) | info on Rv1064c/lpqV |
| Rv0386/- | (cc=0.4737) | info on Rv0386/- |
| Rv3060c/- | (cc=0.4718) | info on Rv3060c/- |
| Rv1736c/narX | (cc=0.469) | info on Rv1736c/narX |
Correlation of Rv3073c/- with Rv1940/ribA1
Normalized LFCs for Rv3073c/-:
(description and provenance of datasets)
| Rv3073c/- | Rv1940/ribA1 | |
| Fe_supp_jason_reseq | -1.754 | -0.242 |
| low_pH_jason_reseq | -0.87 | -0.478 |
| NO_jason_reseq | 0.643 | 0.693 |
| B6_jason_reseq | 0.322 | 0.547 |
| MHCII_jason_reseq | -1.012 | 0.377 |
| Isoniazid02 | -0.223 | 0.34 |
| Rifampicin4 | 0.536 | -0.076 |
| Ethambutol3 | 4.925 | -0.173 |
| Meropenem3 | 0.152 | 0.137 |
| Vancomycin16 | 0.239 | -0.294 |
| Rv2680_day32 | -0.119 | 0.15 |
| H37Rv_KO_MarP | -0.093 | -0.395 |
| hypoxia_3wks | -1.447 | 0.319 |
| hypoxia_6wks | -1.222 | -0.054 |
| glycerol | -0.347 | -0.151 |
| cholesterol | -0.386 | 0.955 |
| AJ | 0.0 | 0.526 |
| Bibs02 | -0.563 | 0.97 |
| Bibs02c | 0.029 | -0.729 |
| BL6 | -1.637 | -1.835 |
| BL6a | -0.528 | -1.185 |
| BXD01 | -2.734 | -0.377 |
| BXD010 | -3.574 | -2.104 |
| BXD011 | -2.55 | -1.335 |
| BXD03 | -3.26 | -1.162 |
| BXD04 | -1.454 | -1.644 |
| BXD05 | -3.59 | -1.493 |
| BXD06 | -2.446 | -1.094 |
| BXD07 | -3.277 | -1.309 |
| BXD08 | -2.127 | -0.287 |
| BXD09 | -1.012 | -0.954 |
| CAST | -0.432 | 0.058 |
| CCcont | -3.036 | -2.403 |
| DS01 | -0.055 | -0.009 |
| DS02 | -1.155 | 0.145 |
| DS04 | -1.001 | 0.87 |
| DS0c | -0.248 | 0.793 |
| GP01 | -1.056 | -0.597 |
| GP02 | 0.438 | 1.119 |
| GP0c | 0.545 | -0.651 |
| NOD | -1.227 | 0.47 |
| NZO | -0.663 | 0.0 |
| PWK | -1.178 | -0.155 |
| H37Rv_KO_CtpC | 0.695 | -0.047 |
| H37Rv_KO_CtpD | -3.62 | -1.751 |
| H37Rv_KO_Rv1272 | -3.682 | -1.875 |
| H37Rv_KO_SugABC | -2.302 | -1.902 |
| H37Rv_KO_MbtN | -2.395 | -0.912 |
| Trans05 | -1.365 | 0.549 |
| macrophage_unactivated | -1.348 | -0.237 |
| IL1 | -0.928 | 0.279 |
| Rapamycin | 0.835 | 0.687 |
| Tcell | -0.358 | -0.414 |
| GMCSF | -0.391 | 1.555 |
| IFNab | 0.822 | 0.771 |
| IFNg | -1.684 | -0.064 |
| IFNg_GMCSF1 | -0.346 | 0.801 |
| Rv1432_day32 | 0.0 | -0.709 |
| Rv1565c_day32 | 0.0 | 0.014 |
| secA2_input | -0.415 | -0.102 |
| delta_Rv3594 | -2.842 | 0.223 |
| delta_Rv3717 | -1.845 | 0.433 |
| delta_Rv3811 | -1.487 | 0.314 |
| delta_Rv0954 | -0.646 | -0.141 |
| PonA1 | 0.461 | 0.731 |
| EccD1_KO | -0.77 | -0.477 |
| EspI_KO | -1.469 | -0.585 |
| PE35_KO | -0.875 | -0.079 |
| PPE68_KO | -2.454 | 0.186 |
| glycerol2 | -1.827 | 0.294 |
| lignocerate | -1.644 | -0.245 |
| oleate | -0.936 | 0.98 |
| phosphatidylcholine | -1.23 | 0.773 |
| acetate | -3.548 | -0.213 |
| glucAc | -2.382 | -1.081 |
| Rv0950ko | 0.103 | -0.736 |
| Rv1096ko | -2.621 | 0.63 |
| Rv3684ko | -1.284 | -0.498 |
| delta_otsA_trehalose | 0.126 | 0.345 |