Top 10 genes with highest correlation to Rv3073c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3242c/- | (cc=0.5807) | info on Rv3242c/- |
| Rv0325/- | (cc=0.5309) | info on Rv0325/- |
| Rv0139/- | (cc=0.4989) | info on Rv0139/- |
| Rv1940/ribA1 | (cc=0.4924) | info on Rv1940/ribA1 |
| Rv1789/PPE26 | (cc=0.4847) | info on Rv1789/PPE26 |
| Rv3450c/eccB4 | (cc=0.4754) | info on Rv3450c/eccB4 |
| Rv1064c/lpqV | (cc=0.4739) | info on Rv1064c/lpqV |
| Rv0386/- | (cc=0.4737) | info on Rv0386/- |
| Rv3060c/- | (cc=0.4718) | info on Rv3060c/- |
| Rv1736c/narX | (cc=0.469) | info on Rv1736c/narX |
Correlation of Rv3073c/- with Rv0386/-
Normalized LFCs for Rv3073c/-:
(description and provenance of datasets)
| Rv3073c/- | Rv0386/- | |
| Fe_supp_jason_reseq | -1.754 | -0.396 |
| low_pH_jason_reseq | -0.87 | 0.064 |
| NO_jason_reseq | 0.643 | 0.234 |
| B6_jason_reseq | 0.322 | 1.913 |
| MHCII_jason_reseq | -1.012 | 0.462 |
| Isoniazid02 | -0.223 | 1.461 |
| Rifampicin4 | 0.536 | -0.106 |
| Ethambutol3 | 4.925 | 1.66 |
| Meropenem3 | 0.152 | 0.108 |
| Vancomycin16 | 0.239 | 0.202 |
| Rv2680_day32 | -0.119 | -0.185 |
| H37Rv_KO_MarP | -0.093 | 0.598 |
| hypoxia_3wks | -1.447 | 0.132 |
| hypoxia_6wks | -1.222 | 0.138 |
| glycerol | -0.347 | 0.01 |
| cholesterol | -0.386 | -0.205 |
| AJ | 0.0 | -0.101 |
| Bibs02 | -0.563 | 0.532 |
| Bibs02c | 0.029 | 0.226 |
| BL6 | -1.637 | 0.13 |
| BL6a | -0.528 | 0.056 |
| BXD01 | -2.734 | -0.611 |
| BXD010 | -3.574 | -0.231 |
| BXD011 | -2.55 | -0.35 |
| BXD03 | -3.26 | -0.092 |
| BXD04 | -1.454 | -0.627 |
| BXD05 | -3.59 | -0.377 |
| BXD06 | -2.446 | -0.451 |
| BXD07 | -3.277 | -0.449 |
| BXD08 | -2.127 | -0.485 |
| BXD09 | -1.012 | -0.343 |
| CAST | -0.432 | 0.776 |
| CCcont | -3.036 | -0.564 |
| DS01 | -0.055 | -0.272 |
| DS02 | -1.155 | 0.08 |
| DS04 | -1.001 | 0.167 |
| DS0c | -0.248 | -0.159 |
| GP01 | -1.056 | 0.302 |
| GP02 | 0.438 | 0.233 |
| GP0c | 0.545 | -0.325 |
| NOD | -1.227 | 0.47 |
| NZO | -0.663 | 0.41 |
| PWK | -1.178 | 0.236 |
| H37Rv_KO_CtpC | 0.695 | 0.491 |
| H37Rv_KO_CtpD | -3.62 | 0.12 |
| H37Rv_KO_Rv1272 | -3.682 | -0.611 |
| H37Rv_KO_SugABC | -2.302 | -0.024 |
| H37Rv_KO_MbtN | -2.395 | -0.606 |
| Trans05 | -1.365 | -0.063 |
| macrophage_unactivated | -1.348 | 0.42 |
| IL1 | -0.928 | -0.021 |
| Rapamycin | 0.835 | -0.129 |
| Tcell | -0.358 | 0.046 |
| GMCSF | -0.391 | 0.037 |
| IFNab | 0.822 | -0.215 |
| IFNg | -1.684 | 0.27 |
| IFNg_GMCSF1 | -0.346 | 0.088 |
| Rv1432_day32 | 0.0 | 0.441 |
| Rv1565c_day32 | 0.0 | -0.114 |
| secA2_input | -0.415 | 0.0 |
| delta_Rv3594 | -2.842 | -0.28 |
| delta_Rv3717 | -1.845 | 0.081 |
| delta_Rv3811 | -1.487 | -0.372 |
| delta_Rv0954 | -0.646 | -0.349 |
| PonA1 | 0.461 | 0.349 |
| EccD1_KO | -0.77 | 0.73 |
| EspI_KO | -1.469 | 0.251 |
| PE35_KO | -0.875 | 0.0 |
| PPE68_KO | -2.454 | -0.109 |
| glycerol2 | -1.827 | 0.136 |
| lignocerate | -1.644 | 0.229 |
| oleate | -0.936 | 0.422 |
| phosphatidylcholine | -1.23 | 0.148 |
| acetate | -3.548 | 0.05 |
| glucAc | -2.382 | -0.021 |
| Rv0950ko | 0.103 | 0.703 |
| Rv1096ko | -2.621 | 0.938 |
| Rv3684ko | -1.284 | 1.019 |
| delta_otsA_trehalose | 0.126 | 0.059 |