Top 10 genes with highest correlation to Rv3073c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3242c/- | (cc=0.5807) | info on Rv3242c/- |
| Rv0325/- | (cc=0.5309) | info on Rv0325/- |
| Rv0139/- | (cc=0.4989) | info on Rv0139/- |
| Rv1940/ribA1 | (cc=0.4924) | info on Rv1940/ribA1 |
| Rv1789/PPE26 | (cc=0.4847) | info on Rv1789/PPE26 |
| Rv3450c/eccB4 | (cc=0.4754) | info on Rv3450c/eccB4 |
| Rv1064c/lpqV | (cc=0.4739) | info on Rv1064c/lpqV |
| Rv0386/- | (cc=0.4737) | info on Rv0386/- |
| Rv3060c/- | (cc=0.4718) | info on Rv3060c/- |
| Rv1736c/narX | (cc=0.469) | info on Rv1736c/narX |
Correlation of Rv3073c/- with Rv3060c/-
Normalized LFCs for Rv3073c/-:
(description and provenance of datasets)
| Rv3073c/- | Rv3060c/- | |
| Fe_supp_jason_reseq | -1.754 | -0.284 |
| low_pH_jason_reseq | -0.87 | -0.56 |
| NO_jason_reseq | 0.643 | -0.21 |
| B6_jason_reseq | 0.322 | -0.168 |
| MHCII_jason_reseq | -1.012 | 0.013 |
| Isoniazid02 | -0.223 | -0.314 |
| Rifampicin4 | 0.536 | -0.393 |
| Ethambutol3 | 4.925 | 2.165 |
| Meropenem3 | 0.152 | 0.212 |
| Vancomycin16 | 0.239 | -0.17 |
| Rv2680_day32 | -0.119 | -0.044 |
| H37Rv_KO_MarP | -0.093 | 0.813 |
| hypoxia_3wks | -1.447 | -0.431 |
| hypoxia_6wks | -1.222 | -0.643 |
| glycerol | -0.347 | -1.012 |
| cholesterol | -0.386 | -0.686 |
| AJ | 0.0 | -0.04 |
| Bibs02 | -0.563 | -0.632 |
| Bibs02c | 0.029 | 0.036 |
| BL6 | -1.637 | -1.318 |
| BL6a | -0.528 | -0.75 |
| BXD01 | -2.734 | -0.981 |
| BXD010 | -3.574 | -1.011 |
| BXD011 | -2.55 | -0.872 |
| BXD03 | -3.26 | -0.581 |
| BXD04 | -1.454 | -1.323 |
| BXD05 | -3.59 | -0.371 |
| BXD06 | -2.446 | -0.814 |
| BXD07 | -3.277 | -0.964 |
| BXD08 | -2.127 | -0.63 |
| BXD09 | -1.012 | -1.128 |
| CAST | -0.432 | -0.327 |
| CCcont | -3.036 | -0.957 |
| DS01 | -0.055 | -0.53 |
| DS02 | -1.155 | -0.972 |
| DS04 | -1.001 | -0.655 |
| DS0c | -0.248 | -0.647 |
| GP01 | -1.056 | -1.267 |
| GP02 | 0.438 | 0.01 |
| GP0c | 0.545 | -1.594 |
| NOD | -1.227 | -0.688 |
| NZO | -0.663 | 0.208 |
| PWK | -1.178 | -0.331 |
| H37Rv_KO_CtpC | 0.695 | -0.106 |
| H37Rv_KO_CtpD | -3.62 | 0.222 |
| H37Rv_KO_Rv1272 | -3.682 | -1.167 |
| H37Rv_KO_SugABC | -2.302 | -0.678 |
| H37Rv_KO_MbtN | -2.395 | -0.978 |
| Trans05 | -1.365 | -0.441 |
| macrophage_unactivated | -1.348 | -0.893 |
| IL1 | -0.928 | -1.112 |
| Rapamycin | 0.835 | -0.393 |
| Tcell | -0.358 | -0.505 |
| GMCSF | -0.391 | 0.063 |
| IFNab | 0.822 | -0.508 |
| IFNg | -1.684 | -0.27 |
| IFNg_GMCSF1 | -0.346 | -0.487 |
| Rv1432_day32 | 0.0 | 0.098 |
| Rv1565c_day32 | 0.0 | -0.586 |
| secA2_input | -0.415 | -0.554 |
| delta_Rv3594 | -2.842 | 0.064 |
| delta_Rv3717 | -1.845 | 0.22 |
| delta_Rv3811 | -1.487 | -0.32 |
| delta_Rv0954 | -0.646 | 0.176 |
| PonA1 | 0.461 | 0.484 |
| EccD1_KO | -0.77 | 0.414 |
| EspI_KO | -1.469 | 0.388 |
| PE35_KO | -0.875 | 0.461 |
| PPE68_KO | -2.454 | -0.397 |
| glycerol2 | -1.827 | 0.353 |
| lignocerate | -1.644 | -0.371 |
| oleate | -0.936 | -0.398 |
| phosphatidylcholine | -1.23 | 0.183 |
| acetate | -3.548 | -0.785 |
| glucAc | -2.382 | -0.589 |
| Rv0950ko | 0.103 | 0.0 |
| Rv1096ko | -2.621 | -0.371 |
| Rv3684ko | -1.284 | -0.675 |
| delta_otsA_trehalose | 0.126 | 0.494 |