Top 10 genes with highest correlation to Rv3050c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0929/pstC2 | (cc=0.7818) | info on Rv0929/pstC2 |
| Rv3218/- | (cc=0.777) | info on Rv3218/- |
| Rv0642c/mmaA4 | (cc=0.7759) | info on Rv0642c/mmaA4 |
| Rv0928/pstS3 | (cc=0.7657) | info on Rv0928/pstS3 |
| Rv0930/pstA1 | (cc=0.7595) | info on Rv0930/pstA1 |
| Rv0502/- | (cc=0.7399) | info on Rv0502/- |
| Rv1058/fadD14 | (cc=0.7349) | info on Rv1058/fadD14 |
| Rv3818/- | (cc=0.7335) | info on Rv3818/- |
| Rv0820/phoT | (cc=0.7267) | info on Rv0820/phoT |
| Rv2735c/- | (cc=0.6974) | info on Rv2735c/- |
Correlation of Rv3050c/- with Rv3818/-
Normalized LFCs for Rv3050c/-:
(description and provenance of datasets)
| Rv3050c/- | Rv3818/- | |
| Fe_supp_jason_reseq | -1.053 | -0.103 |
| low_pH_jason_reseq | 1.193 | -1.643 |
| NO_jason_reseq | 0.522 | -0.121 |
| B6_jason_reseq | -2.547 | -3.085 |
| MHCII_jason_reseq | -1.955 | -2.252 |
| Isoniazid02 | -0.063 | 1.234 |
| Rifampicin4 | -2.594 | -3.579 |
| Ethambutol3 | -0.612 | 0.377 |
| Meropenem3 | -0.918 | -0.771 |
| Vancomycin16 | -1.496 | -3.321 |
| Rv2680_day32 | 1.932 | 0.796 |
| H37Rv_KO_MarP | 0.906 | -2.515 |
| hypoxia_3wks | 1.611 | 2.592 |
| hypoxia_6wks | 2.7 | 2.946 |
| glycerol | 1.104 | -0.791 |
| cholesterol | -0.098 | 0.645 |
| AJ | 0.541 | -1.837 |
| Bibs02 | 0.115 | 0.474 |
| Bibs02c | 0.258 | 0.067 |
| BL6 | 2.934 | 1.975 |
| BL6a | 4.475 | 1.897 |
| BXD01 | 3.241 | 1.939 |
| BXD010 | 3.787 | 3.057 |
| BXD011 | 5.572 | 2.413 |
| BXD03 | 3.365 | 3.807 |
| BXD04 | 2.343 | 2.431 |
| BXD05 | 3.473 | 2.693 |
| BXD06 | 3.983 | 2.991 |
| BXD07 | 3.042 | 2.302 |
| BXD08 | 3.65 | 1.691 |
| BXD09 | 4.687 | 2.345 |
| CAST | -0.501 | -0.794 |
| CCcont | 2.452 | 3.269 |
| DS01 | -0.926 | 0.842 |
| DS02 | -0.852 | -0.072 |
| DS04 | 2.503 | 2.485 |
| DS0c | 0.616 | 0.966 |
| GP01 | 3.843 | 0.747 |
| GP02 | 1.738 | 0.829 |
| GP0c | 3.849 | 1.295 |
| NOD | -0.151 | -0.88 |
| NZO | -0.433 | -1.087 |
| PWK | -0.274 | -0.132 |
| H37Rv_KO_CtpC | 1.177 | 2.081 |
| H37Rv_KO_CtpD | 1.634 | 1.548 |
| H37Rv_KO_Rv1272 | 3.492 | 1.572 |
| H37Rv_KO_SugABC | 4.142 | 1.297 |
| H37Rv_KO_MbtN | 2.344 | 4.543 |
| Trans05 | 4.016 | 2.32 |
| macrophage_unactivated | 0.063 | 0.739 |
| IL1 | 0.291 | -0.341 |
| Rapamycin | 1.019 | 0.095 |
| Tcell | 2.255 | 0.443 |
| GMCSF | -0.573 | 0.51 |
| IFNab | 0.599 | 1.59 |
| IFNg | -1.227 | 1.114 |
| IFNg_GMCSF1 | -0.61 | -0.641 |
| Rv1432_day32 | 5.592 | 2.214 |
| Rv1565c_day32 | 0.458 | 0.218 |
| secA2_input | 0.321 | -1.506 |
| delta_Rv3594 | 1.42 | 0.017 |
| delta_Rv3717 | 3.259 | 1.251 |
| delta_Rv3811 | 0.932 | 0.858 |
| delta_Rv0954 | -1.765 | -2.768 |
| PonA1 | -1.855 | -0.682 |
| EccD1_KO | -2.072 | -0.826 |
| EspI_KO | -3.274 | -0.245 |
| PE35_KO | -1.613 | 0.324 |
| PPE68_KO | -1.261 | -0.275 |
| glycerol2 | -3.636 | -0.738 |
| lignocerate | -2.568 | -1.76 |
| oleate | -3.374 | -0.364 |
| phosphatidylcholine | -3.892 | -2.681 |
| acetate | -1.584 | 0.188 |
| glucAc | -0.723 | 0.06 |
| Rv0950ko | -0.874 | -1.426 |
| Rv1096ko | -1.384 | -0.434 |
| Rv3684ko | 1.952 | -0.472 |
| delta_otsA_trehalose | -0.519 | -1.157 |