Top 10 genes with highest correlation to Rv3050c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0929/pstC2 | (cc=0.7818) | info on Rv0929/pstC2 |
| Rv3218/- | (cc=0.777) | info on Rv3218/- |
| Rv0642c/mmaA4 | (cc=0.7759) | info on Rv0642c/mmaA4 |
| Rv0928/pstS3 | (cc=0.7657) | info on Rv0928/pstS3 |
| Rv0930/pstA1 | (cc=0.7595) | info on Rv0930/pstA1 |
| Rv0502/- | (cc=0.7399) | info on Rv0502/- |
| Rv1058/fadD14 | (cc=0.7349) | info on Rv1058/fadD14 |
| Rv3818/- | (cc=0.7335) | info on Rv3818/- |
| Rv0820/phoT | (cc=0.7267) | info on Rv0820/phoT |
| Rv2735c/- | (cc=0.6974) | info on Rv2735c/- |
Correlation of Rv3050c/- with Rv0930/pstA1
Normalized LFCs for Rv3050c/-:
(description and provenance of datasets)
| Rv3050c/- | Rv0930/pstA1 | |
| Fe_supp_jason_reseq | -1.053 | -3.511 |
| low_pH_jason_reseq | 1.193 | 1.514 |
| NO_jason_reseq | 0.522 | -4.528 |
| B6_jason_reseq | -2.547 | 0.559 |
| MHCII_jason_reseq | -1.955 | 0.542 |
| Isoniazid02 | -0.063 | -0.895 |
| Rifampicin4 | -2.594 | -2.475 |
| Ethambutol3 | -0.612 | -0.804 |
| Meropenem3 | -0.918 | -1.095 |
| Vancomycin16 | -1.496 | -0.873 |
| Rv2680_day32 | 1.932 | 4.124 |
| H37Rv_KO_MarP | 0.906 | -1.709 |
| hypoxia_3wks | 1.611 | -4.797 |
| hypoxia_6wks | 2.7 | -0.643 |
| glycerol | 1.104 | 2.384 |
| cholesterol | -0.098 | 3.675 |
| AJ | 0.541 | 2.151 |
| Bibs02 | 0.115 | 2.099 |
| Bibs02c | 0.258 | 3.109 |
| BL6 | 2.934 | 5.861 |
| BL6a | 4.475 | 6.0 |
| BXD01 | 3.241 | 6.0 |
| BXD010 | 3.787 | 6.0 |
| BXD011 | 5.572 | 6.0 |
| BXD03 | 3.365 | 5.702 |
| BXD04 | 2.343 | 6.0 |
| BXD05 | 3.473 | 6.0 |
| BXD06 | 3.983 | 6.0 |
| BXD07 | 3.042 | 6.0 |
| BXD08 | 3.65 | 6.0 |
| BXD09 | 4.687 | 6.0 |
| CAST | -0.501 | 3.707 |
| CCcont | 2.452 | 3.688 |
| DS01 | -0.926 | 1.591 |
| DS02 | -0.852 | 2.105 |
| DS04 | 2.503 | 2.995 |
| DS0c | 0.616 | 0.652 |
| GP01 | 3.843 | 5.309 |
| GP02 | 1.738 | 5.465 |
| GP0c | 3.849 | 6.0 |
| NOD | -0.151 | 2.758 |
| NZO | -0.433 | 2.082 |
| PWK | -0.274 | 4.287 |
| H37Rv_KO_CtpC | 1.177 | 4.761 |
| H37Rv_KO_CtpD | 1.634 | 1.322 |
| H37Rv_KO_Rv1272 | 3.492 | 4.933 |
| H37Rv_KO_SugABC | 4.142 | 4.965 |
| H37Rv_KO_MbtN | 2.344 | 6.0 |
| Trans05 | 4.016 | 5.408 |
| macrophage_unactivated | 0.063 | -2.285 |
| IL1 | 0.291 | -2.847 |
| Rapamycin | 1.019 | -3.428 |
| Tcell | 2.255 | -1.232 |
| GMCSF | -0.573 | -2.64 |
| IFNab | 0.599 | 2.833 |
| IFNg | -1.227 | -3.643 |
| IFNg_GMCSF1 | -0.61 | -4.515 |
| Rv1432_day32 | 5.592 | 6.0 |
| Rv1565c_day32 | 0.458 | -0.554 |
| secA2_input | 0.321 | -1.904 |
| delta_Rv3594 | 1.42 | 0.231 |
| delta_Rv3717 | 3.259 | 2.636 |
| delta_Rv3811 | 0.932 | 0.754 |
| delta_Rv0954 | -1.765 | -3.748 |
| PonA1 | -1.855 | -2.389 |
| EccD1_KO | -2.072 | -2.999 |
| EspI_KO | -3.274 | -2.923 |
| PE35_KO | -1.613 | -1.552 |
| PPE68_KO | -1.261 | -2.227 |
| glycerol2 | -3.636 | -5.348 |
| lignocerate | -2.568 | -1.016 |
| oleate | -3.374 | -5.412 |
| phosphatidylcholine | -3.892 | -3.438 |
| acetate | -1.584 | -0.605 |
| glucAc | -0.723 | -0.409 |
| Rv0950ko | -0.874 | -3.95 |
| Rv1096ko | -1.384 | 0.537 |
| Rv3684ko | 1.952 | -0.517 |
| delta_otsA_trehalose | -0.519 | 0.296 |