Top 10 genes with highest correlation to Rv3050c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0929/pstC2 | (cc=0.7818) | info on Rv0929/pstC2 |
| Rv3218/- | (cc=0.777) | info on Rv3218/- |
| Rv0642c/mmaA4 | (cc=0.7759) | info on Rv0642c/mmaA4 |
| Rv0928/pstS3 | (cc=0.7657) | info on Rv0928/pstS3 |
| Rv0930/pstA1 | (cc=0.7595) | info on Rv0930/pstA1 |
| Rv0502/- | (cc=0.7399) | info on Rv0502/- |
| Rv1058/fadD14 | (cc=0.7349) | info on Rv1058/fadD14 |
| Rv3818/- | (cc=0.7335) | info on Rv3818/- |
| Rv0820/phoT | (cc=0.7267) | info on Rv0820/phoT |
| Rv2735c/- | (cc=0.6974) | info on Rv2735c/- |
Correlation of Rv3050c/- with Rv0502/-
Normalized LFCs for Rv3050c/-:
(description and provenance of datasets)
| Rv3050c/- | Rv0502/- | |
| Fe_supp_jason_reseq | -1.053 | 0.696 |
| low_pH_jason_reseq | 1.193 | 1.318 |
| NO_jason_reseq | 0.522 | 1.78 |
| B6_jason_reseq | -2.547 | -0.709 |
| MHCII_jason_reseq | -1.955 | 0.086 |
| Isoniazid02 | -0.063 | -0.332 |
| Rifampicin4 | -2.594 | 0.623 |
| Ethambutol3 | -0.612 | 0.023 |
| Meropenem3 | -0.918 | 0.289 |
| Vancomycin16 | -1.496 | -0.767 |
| Rv2680_day32 | 1.932 | 0.065 |
| H37Rv_KO_MarP | 0.906 | 0.608 |
| hypoxia_3wks | 1.611 | 2.544 |
| hypoxia_6wks | 2.7 | 1.639 |
| glycerol | 1.104 | 1.066 |
| cholesterol | -0.098 | 0.715 |
| AJ | 0.541 | 0.904 |
| Bibs02 | 0.115 | 0.199 |
| Bibs02c | 0.258 | 0.059 |
| BL6 | 2.934 | 1.258 |
| BL6a | 4.475 | 2.429 |
| BXD01 | 3.241 | 2.883 |
| BXD010 | 3.787 | 2.113 |
| BXD011 | 5.572 | 2.075 |
| BXD03 | 3.365 | 1.244 |
| BXD04 | 2.343 | 2.334 |
| BXD05 | 3.473 | 2.061 |
| BXD06 | 3.983 | 2.32 |
| BXD07 | 3.042 | 2.325 |
| BXD08 | 3.65 | 1.898 |
| BXD09 | 4.687 | 2.995 |
| CAST | -0.501 | -0.771 |
| CCcont | 2.452 | 2.029 |
| DS01 | -0.926 | 0.489 |
| DS02 | -0.852 | 0.55 |
| DS04 | 2.503 | 1.216 |
| DS0c | 0.616 | 0.823 |
| GP01 | 3.843 | 1.933 |
| GP02 | 1.738 | 1.699 |
| GP0c | 3.849 | 1.132 |
| NOD | -0.151 | -0.236 |
| NZO | -0.433 | 0.267 |
| PWK | -0.274 | -1.037 |
| H37Rv_KO_CtpC | 1.177 | 0.198 |
| H37Rv_KO_CtpD | 1.634 | 1.721 |
| H37Rv_KO_Rv1272 | 3.492 | 2.664 |
| H37Rv_KO_SugABC | 4.142 | 1.635 |
| H37Rv_KO_MbtN | 2.344 | 2.769 |
| Trans05 | 4.016 | 3.129 |
| macrophage_unactivated | 0.063 | 1.49 |
| IL1 | 0.291 | -1.797 |
| Rapamycin | 1.019 | -0.166 |
| Tcell | 2.255 | 1.411 |
| GMCSF | -0.573 | -0.23 |
| IFNab | 0.599 | 0.623 |
| IFNg | -1.227 | -0.676 |
| IFNg_GMCSF1 | -0.61 | -0.38 |
| Rv1432_day32 | 5.592 | 2.034 |
| Rv1565c_day32 | 0.458 | -1.219 |
| secA2_input | 0.321 | -0.471 |
| delta_Rv3594 | 1.42 | 0.74 |
| delta_Rv3717 | 3.259 | 1.886 |
| delta_Rv3811 | 0.932 | 1.108 |
| delta_Rv0954 | -1.765 | -1.868 |
| PonA1 | -1.855 | -1.487 |
| EccD1_KO | -2.072 | -1.075 |
| EspI_KO | -3.274 | -0.613 |
| PE35_KO | -1.613 | -1.654 |
| PPE68_KO | -1.261 | -1.494 |
| glycerol2 | -3.636 | 0.551 |
| lignocerate | -2.568 | -0.111 |
| oleate | -3.374 | 0.801 |
| phosphatidylcholine | -3.892 | -0.419 |
| acetate | -1.584 | 0.284 |
| glucAc | -0.723 | 0.006 |
| Rv0950ko | -0.874 | -1.01 |
| Rv1096ko | -1.384 | -1.439 |
| Rv3684ko | 1.952 | -1.061 |
| delta_otsA_trehalose | -0.519 | -0.207 |