Top 10 genes with highest correlation to Rv3024c/trmU:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3419c/gcp | (cc=0.7054) | info on Rv3419c/gcp |
| Rv1712/cmk | (cc=0.6522) | info on Rv1712/cmk |
| Rv1239c/corA | (cc=0.6303) | info on Rv1239c/corA |
| Rv3210c/- | (cc=0.6189) | info on Rv3210c/- |
| Rv3719/- | (cc=0.6167) | info on Rv3719/- |
| Rv1633/uvrB | (cc=0.6001) | info on Rv1633/uvrB |
| Rv0642c/mmaA4 | (cc=0.5985) | info on Rv0642c/mmaA4 |
| Rv2842c/- | (cc=0.5983) | info on Rv2842c/- |
| Rv3218/- | (cc=0.595) | info on Rv3218/- |
| Rv0949/uvrD1 | (cc=0.5854) | info on Rv0949/uvrD1 |
Correlation of Rv3024c/trmU with Rv1239c/corA
Normalized LFCs for Rv3024c/trmU:
(description and provenance of datasets)
| Rv3024c/trmU | Rv1239c/corA | |
| Fe_supp_jason_reseq | 1.61 | -0.69 |
| low_pH_jason_reseq | -0.211 | 1.064 |
| NO_jason_reseq | 3.071 | 1.433 |
| B6_jason_reseq | 0.209 | 0.087 |
| MHCII_jason_reseq | -1.671 | -1.266 |
| Isoniazid02 | 0.0 | 0.036 |
| Rifampicin4 | 0.0 | -0.625 |
| Ethambutol3 | 0.0 | 0.0 |
| Meropenem3 | 0.0 | -1.067 |
| Vancomycin16 | 0.0 | -0.459 |
| Rv2680_day32 | -0.161 | 0.318 |
| H37Rv_KO_MarP | -1.197 | 0.505 |
| hypoxia_3wks | -1.782 | -2.117 |
| hypoxia_6wks | -1.222 | 0.848 |
| glycerol | 0.0 | 0.984 |
| cholesterol | 0.0 | 0.04 |
| AJ | 0.0 | 1.869 |
| Bibs02 | 0.0 | -0.338 |
| Bibs02c | 0.0 | -0.69 |
| BL6 | 1.346 | 1.43 |
| BL6a | 1.633 | 2.099 |
| BXD01 | 2.369 | 2.917 |
| BXD010 | 1.227 | 2.38 |
| BXD011 | 2.293 | 3.779 |
| BXD03 | 1.849 | 2.051 |
| BXD04 | 3.721 | 3.404 |
| BXD05 | 2.084 | 2.764 |
| BXD06 | 2.098 | 3.273 |
| BXD07 | 1.541 | 2.452 |
| BXD08 | 2.027 | 3.451 |
| BXD09 | 1.286 | 2.319 |
| CAST | 0.23 | 3.712 |
| CCcont | 1.606 | 0.288 |
| DS01 | 0.0 | -0.732 |
| DS02 | 0.0 | -1.182 |
| DS04 | 0.822 | 0.132 |
| DS0c | 0.0 | -0.757 |
| GP01 | 0.0 | -0.288 |
| GP02 | 0.0 | 0.034 |
| GP0c | 0.721 | 0.251 |
| NOD | 0.0 | 1.23 |
| NZO | 0.0 | 2.164 |
| PWK | 0.196 | 4.489 |
| H37Rv_KO_CtpC | 1.808 | 0.494 |
| H37Rv_KO_CtpD | 1.409 | 1.213 |
| H37Rv_KO_Rv1272 | 0.387 | 1.06 |
| H37Rv_KO_SugABC | 0.272 | 1.269 |
| H37Rv_KO_MbtN | 2.842 | 0.732 |
| Trans05 | 0.249 | 1.737 |
| macrophage_unactivated | -1.531 | -2.257 |
| IL1 | -1.163 | -1.0 |
| Rapamycin | -1.795 | -2.427 |
| Tcell | -0.228 | 0.596 |
| GMCSF | -2.131 | -0.694 |
| IFNab | 0.0 | -2.013 |
| IFNg | -1.849 | -1.505 |
| IFNg_GMCSF1 | -1.524 | -2.017 |
| Rv1432_day32 | -2.351 | 0.731 |
| Rv1565c_day32 | -0.599 | -1.311 |
| secA2_input | 1.993 | -0.377 |
| delta_Rv3594 | 0.659 | -0.234 |
| delta_Rv3717 | 3.088 | 0.766 |
| delta_Rv3811 | 1.24 | -1.084 |
| delta_Rv0954 | -2.089 | -0.596 |
| PonA1 | -1.657 | 0.792 |
| EccD1_KO | 1.194 | -0.72 |
| EspI_KO | -2.102 | -0.941 |
| PE35_KO | -3.039 | -0.998 |
| PPE68_KO | -2.582 | -0.893 |
| glycerol2 | -2.163 | -1.449 |
| lignocerate | -2.034 | -2.954 |
| oleate | -2.562 | -2.884 |
| phosphatidylcholine | -2.162 | -2.578 |
| acetate | -0.904 | -0.785 |
| glucAc | -0.991 | -1.674 |
| Rv0950ko | 1.366 | 1.447 |
| Rv1096ko | 2.657 | 0.072 |
| Rv3684ko | 2.607 | 1.601 |
| delta_otsA_trehalose | 2.212 | 0.147 |