Top 10 genes with highest correlation to Rv3015c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2458/mmuM | (cc=0.5354) | info on Rv2458/mmuM |
| Rv0307c/- | (cc=0.4707) | info on Rv0307c/- |
| Rv2066/cobI | (cc=0.4689) | info on Rv2066/cobI |
| Rv2095c/pafC | (cc=0.4679) | info on Rv2095c/pafC |
| Rv2601/speE | (cc=0.4595) | info on Rv2601/speE |
| Rv0999/- | (cc=0.4331) | info on Rv0999/- |
| Rv3283/sseA | (cc=0.428) | info on Rv3283/sseA |
| Rv2489c/- | (cc=0.4273) | info on Rv2489c/- |
| Rv3414c/sigD | (cc=0.4265) | info on Rv3414c/sigD |
| Rv1940/ribA1 | (cc=0.4242) | info on Rv1940/ribA1 |
Correlation of Rv3015c/- with Rv3414c/sigD
Normalized LFCs for Rv3015c/-:
(description and provenance of datasets)
| Rv3015c/- | Rv3414c/sigD | |
| Fe_supp_jason_reseq | 1.195 | -0.35 |
| low_pH_jason_reseq | -1.154 | -0.557 |
| NO_jason_reseq | -0.575 | -1.72 |
| B6_jason_reseq | -0.73 | 0.28 |
| MHCII_jason_reseq | 0.831 | 1.731 |
| Isoniazid02 | -1.353 | 0.074 |
| Rifampicin4 | -0.49 | -3.985 |
| Ethambutol3 | -1.071 | -0.049 |
| Meropenem3 | -1.027 | -0.847 |
| Vancomycin16 | -1.027 | -2.552 |
| Rv2680_day32 | 0.134 | 0.773 |
| H37Rv_KO_MarP | 0.337 | -0.216 |
| hypoxia_3wks | -0.447 | -0.646 |
| hypoxia_6wks | -0.793 | -1.276 |
| glycerol | 0.524 | 0.301 |
| cholesterol | 0.716 | 0.767 |
| AJ | 0.193 | 0.141 |
| Bibs02 | -0.446 | 0.531 |
| Bibs02c | -0.344 | -0.718 |
| BL6 | -1.52 | -2.194 |
| BL6a | -0.277 | -0.55 |
| BXD01 | -0.043 | -1.442 |
| BXD010 | -1.24 | -2.766 |
| BXD011 | -1.165 | -1.155 |
| BXD03 | -0.091 | -1.249 |
| BXD04 | -0.445 | -0.524 |
| BXD05 | 0.191 | -0.884 |
| BXD06 | -0.967 | -1.35 |
| BXD07 | -0.264 | -1.35 |
| BXD08 | 0.629 | -0.469 |
| BXD09 | -0.343 | -0.905 |
| CAST | 0.37 | -1.124 |
| CCcont | -0.471 | -0.618 |
| DS01 | 0.402 | 0.159 |
| DS02 | 0.37 | 0.09 |
| DS04 | 1.217 | -0.991 |
| DS0c | 1.158 | -0.544 |
| GP01 | -0.126 | -0.981 |
| GP02 | 1.115 | -1.491 |
| GP0c | -0.616 | -1.466 |
| NOD | 1.17 | -0.623 |
| NZO | -0.571 | -0.331 |
| PWK | -0.479 | -0.655 |
| H37Rv_KO_CtpC | 0.12 | -0.141 |
| H37Rv_KO_CtpD | -1.003 | -1.965 |
| H37Rv_KO_Rv1272 | 0.824 | -1.256 |
| H37Rv_KO_SugABC | 0.591 | 0.751 |
| H37Rv_KO_MbtN | 0.044 | 0.261 |
| Trans05 | -0.491 | -0.638 |
| macrophage_unactivated | -0.505 | -0.587 |
| IL1 | 0.863 | 0.0 |
| Rapamycin | 0.058 | 0.506 |
| Tcell | -1.352 | -0.212 |
| GMCSF | 1.611 | -1.053 |
| IFNab | 0.834 | 0.278 |
| IFNg | -0.545 | -0.086 |
| IFNg_GMCSF1 | 0.346 | 0.0 |
| Rv1432_day32 | -0.318 | -0.763 |
| Rv1565c_day32 | -0.526 | -1.106 |
| secA2_input | 0.094 | 0.451 |
| delta_Rv3594 | 0.635 | 1.519 |
| delta_Rv3717 | 0.927 | 0.193 |
| delta_Rv3811 | 1.291 | 0.248 |
| delta_Rv0954 | 0.746 | 0.806 |
| PonA1 | 1.829 | 0.323 |
| EccD1_KO | -1.302 | -1.128 |
| EspI_KO | 0.0 | -0.137 |
| PE35_KO | 0.697 | -1.175 |
| PPE68_KO | -0.141 | -0.39 |
| glycerol2 | -0.354 | -0.022 |
| lignocerate | -1.404 | -0.673 |
| oleate | 0.041 | -0.62 |
| phosphatidylcholine | -0.65 | -0.521 |
| acetate | -0.622 | -0.801 |
| glucAc | -1.819 | -0.32 |
| Rv0950ko | -0.856 | -1.077 |
| Rv1096ko | 0.395 | 0.187 |
| Rv3684ko | 0.727 | -1.556 |
| delta_otsA_trehalose | 1.887 | 2.888 |