Top 10 genes with highest correlation to Rv3015c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2458/mmuM | (cc=0.5354) | info on Rv2458/mmuM |
| Rv0307c/- | (cc=0.4707) | info on Rv0307c/- |
| Rv2066/cobI | (cc=0.4689) | info on Rv2066/cobI |
| Rv2095c/pafC | (cc=0.4679) | info on Rv2095c/pafC |
| Rv2601/speE | (cc=0.4595) | info on Rv2601/speE |
| Rv0999/- | (cc=0.4331) | info on Rv0999/- |
| Rv3283/sseA | (cc=0.428) | info on Rv3283/sseA |
| Rv2489c/- | (cc=0.4273) | info on Rv2489c/- |
| Rv3414c/sigD | (cc=0.4265) | info on Rv3414c/sigD |
| Rv1940/ribA1 | (cc=0.4242) | info on Rv1940/ribA1 |
Correlation of Rv3015c/- with Rv0307c/-
Normalized LFCs for Rv3015c/-:
(description and provenance of datasets)
| Rv3015c/- | Rv0307c/- | |
| Fe_supp_jason_reseq | 1.195 | 2.728 |
| low_pH_jason_reseq | -1.154 | -0.238 |
| NO_jason_reseq | -0.575 | -1.25 |
| B6_jason_reseq | -0.73 | -1.57 |
| MHCII_jason_reseq | 0.831 | 0.433 |
| Isoniazid02 | -1.353 | 0.285 |
| Rifampicin4 | -0.49 | -1.6 |
| Ethambutol3 | -1.071 | -0.529 |
| Meropenem3 | -1.027 | -1.409 |
| Vancomycin16 | -1.027 | -1.056 |
| Rv2680_day32 | 0.134 | 0.947 |
| H37Rv_KO_MarP | 0.337 | 0.571 |
| hypoxia_3wks | -0.447 | 0.096 |
| hypoxia_6wks | -0.793 | -1.351 |
| glycerol | 0.524 | -0.363 |
| cholesterol | 0.716 | 0.084 |
| AJ | 0.193 | -0.588 |
| Bibs02 | -0.446 | 0.517 |
| Bibs02c | -0.344 | 0.868 |
| BL6 | -1.52 | -1.585 |
| BL6a | -0.277 | -0.013 |
| BXD01 | -0.043 | -0.877 |
| BXD010 | -1.24 | -1.089 |
| BXD011 | -1.165 | -0.749 |
| BXD03 | -0.091 | -0.749 |
| BXD04 | -0.445 | -1.273 |
| BXD05 | 0.191 | -1.165 |
| BXD06 | -0.967 | -1.197 |
| BXD07 | -0.264 | -0.691 |
| BXD08 | 0.629 | -1.193 |
| BXD09 | -0.343 | -0.876 |
| CAST | 0.37 | -1.2 |
| CCcont | -0.471 | 0.466 |
| DS01 | 0.402 | 0.905 |
| DS02 | 0.37 | -0.307 |
| DS04 | 1.217 | 0.089 |
| DS0c | 1.158 | 0.88 |
| GP01 | -0.126 | -0.373 |
| GP02 | 1.115 | 0.614 |
| GP0c | -0.616 | -0.33 |
| NOD | 1.17 | -0.075 |
| NZO | -0.571 | -0.774 |
| PWK | -0.479 | -0.897 |
| H37Rv_KO_CtpC | 0.12 | 0.417 |
| H37Rv_KO_CtpD | -1.003 | 1.334 |
| H37Rv_KO_Rv1272 | 0.824 | 0.844 |
| H37Rv_KO_SugABC | 0.591 | 0.79 |
| H37Rv_KO_MbtN | 0.044 | -0.788 |
| Trans05 | -0.491 | -0.108 |
| macrophage_unactivated | -0.505 | -0.391 |
| IL1 | 0.863 | -0.985 |
| Rapamycin | 0.058 | -0.123 |
| Tcell | -1.352 | -2.069 |
| GMCSF | 1.611 | 0.776 |
| IFNab | 0.834 | 0.317 |
| IFNg | -0.545 | -0.599 |
| IFNg_GMCSF1 | 0.346 | -1.002 |
| Rv1432_day32 | -0.318 | -0.652 |
| Rv1565c_day32 | -0.526 | 1.649 |
| secA2_input | 0.094 | -1.378 |
| delta_Rv3594 | 0.635 | 0.6 |
| delta_Rv3717 | 0.927 | -0.828 |
| delta_Rv3811 | 1.291 | 0.568 |
| delta_Rv0954 | 0.746 | 0.8 |
| PonA1 | 1.829 | 2.409 |
| EccD1_KO | -1.302 | 0.707 |
| EspI_KO | 0.0 | 0.913 |
| PE35_KO | 0.697 | 0.522 |
| PPE68_KO | -0.141 | 0.39 |
| glycerol2 | -0.354 | -0.489 |
| lignocerate | -1.404 | -0.57 |
| oleate | 0.041 | -0.145 |
| phosphatidylcholine | -0.65 | -0.557 |
| acetate | -0.622 | -0.756 |
| glucAc | -1.819 | -0.796 |
| Rv0950ko | -0.856 | 0.796 |
| Rv1096ko | 0.395 | 0.443 |
| Rv3684ko | 0.727 | -0.537 |
| delta_otsA_trehalose | 1.887 | 0.812 |