Top 10 genes with highest correlation to Rv3015c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2458/mmuM | (cc=0.5354) | info on Rv2458/mmuM |
| Rv0307c/- | (cc=0.4707) | info on Rv0307c/- |
| Rv2066/cobI | (cc=0.4689) | info on Rv2066/cobI |
| Rv2095c/pafC | (cc=0.4679) | info on Rv2095c/pafC |
| Rv2601/speE | (cc=0.4595) | info on Rv2601/speE |
| Rv0999/- | (cc=0.4331) | info on Rv0999/- |
| Rv3283/sseA | (cc=0.428) | info on Rv3283/sseA |
| Rv2489c/- | (cc=0.4273) | info on Rv2489c/- |
| Rv3414c/sigD | (cc=0.4265) | info on Rv3414c/sigD |
| Rv1940/ribA1 | (cc=0.4242) | info on Rv1940/ribA1 |
Correlation of Rv3015c/- with Rv3283/sseA
Normalized LFCs for Rv3015c/-:
(description and provenance of datasets)
| Rv3015c/- | Rv3283/sseA | |
| Fe_supp_jason_reseq | 1.195 | 3.375 |
| low_pH_jason_reseq | -1.154 | -0.979 |
| NO_jason_reseq | -0.575 | -1.173 |
| B6_jason_reseq | -0.73 | -0.649 |
| MHCII_jason_reseq | 0.831 | 0.406 |
| Isoniazid02 | -1.353 | -1.008 |
| Rifampicin4 | -0.49 | -2.258 |
| Ethambutol3 | -1.071 | -1.254 |
| Meropenem3 | -1.027 | -2.709 |
| Vancomycin16 | -1.027 | -2.735 |
| Rv2680_day32 | 0.134 | -2.317 |
| H37Rv_KO_MarP | 0.337 | -1.319 |
| hypoxia_3wks | -0.447 | -2.181 |
| hypoxia_6wks | -0.793 | -1.934 |
| glycerol | 0.524 | 3.882 |
| cholesterol | 0.716 | 6.0 |
| AJ | 0.193 | -1.793 |
| Bibs02 | -0.446 | -0.796 |
| Bibs02c | -0.344 | 0.235 |
| BL6 | -1.52 | -1.937 |
| BL6a | -0.277 | -0.725 |
| BXD01 | -0.043 | -1.887 |
| BXD010 | -1.24 | -1.856 |
| BXD011 | -1.165 | -1.346 |
| BXD03 | -0.091 | -2.094 |
| BXD04 | -0.445 | -1.915 |
| BXD05 | 0.191 | -1.95 |
| BXD06 | -0.967 | -2.067 |
| BXD07 | -0.264 | -2.006 |
| BXD08 | 0.629 | -1.927 |
| BXD09 | -0.343 | -2.176 |
| CAST | 0.37 | 0.537 |
| CCcont | -0.471 | 0.199 |
| DS01 | 0.402 | 2.616 |
| DS02 | 0.37 | 0.852 |
| DS04 | 1.217 | 1.186 |
| DS0c | 1.158 | 2.855 |
| GP01 | -0.126 | -1.529 |
| GP02 | 1.115 | -1.289 |
| GP0c | -0.616 | -2.014 |
| NOD | 1.17 | 0.952 |
| NZO | -0.571 | -1.542 |
| PWK | -0.479 | -0.59 |
| H37Rv_KO_CtpC | 0.12 | 0.554 |
| H37Rv_KO_CtpD | -1.003 | -0.229 |
| H37Rv_KO_Rv1272 | 0.824 | -0.956 |
| H37Rv_KO_SugABC | 0.591 | -0.926 |
| H37Rv_KO_MbtN | 0.044 | -0.797 |
| Trans05 | -0.491 | -1.893 |
| macrophage_unactivated | -0.505 | 0.0 |
| IL1 | 0.863 | -0.955 |
| Rapamycin | 0.058 | -1.372 |
| Tcell | -1.352 | -1.049 |
| GMCSF | 1.611 | -1.18 |
| IFNab | 0.834 | -1.351 |
| IFNg | -0.545 | -1.195 |
| IFNg_GMCSF1 | 0.346 | -1.405 |
| Rv1432_day32 | -0.318 | -0.999 |
| Rv1565c_day32 | -0.526 | 1.848 |
| secA2_input | 0.094 | 0.881 |
| delta_Rv3594 | 0.635 | -0.569 |
| delta_Rv3717 | 0.927 | -1.432 |
| delta_Rv3811 | 1.291 | -1.487 |
| delta_Rv0954 | 0.746 | 3.34 |
| PonA1 | 1.829 | 4.717 |
| EccD1_KO | -1.302 | 1.085 |
| EspI_KO | 0.0 | 0.665 |
| PE35_KO | 0.697 | 4.078 |
| PPE68_KO | -0.141 | 3.072 |
| glycerol2 | -0.354 | -1.401 |
| lignocerate | -1.404 | -1.494 |
| oleate | 0.041 | -2.752 |
| phosphatidylcholine | -0.65 | -1.162 |
| acetate | -0.622 | -0.377 |
| glucAc | -1.819 | -1.463 |
| Rv0950ko | -0.856 | -0.585 |
| Rv1096ko | 0.395 | -0.148 |
| Rv3684ko | 0.727 | 0.039 |
| delta_otsA_trehalose | 1.887 | -0.281 |