Top 10 genes with highest correlation to Rv3015c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2458/mmuM | (cc=0.5354) | info on Rv2458/mmuM |
| Rv0307c/- | (cc=0.4707) | info on Rv0307c/- |
| Rv2066/cobI | (cc=0.4689) | info on Rv2066/cobI |
| Rv2095c/pafC | (cc=0.4679) | info on Rv2095c/pafC |
| Rv2601/speE | (cc=0.4595) | info on Rv2601/speE |
| Rv0999/- | (cc=0.4331) | info on Rv0999/- |
| Rv3283/sseA | (cc=0.428) | info on Rv3283/sseA |
| Rv2489c/- | (cc=0.4273) | info on Rv2489c/- |
| Rv3414c/sigD | (cc=0.4265) | info on Rv3414c/sigD |
| Rv1940/ribA1 | (cc=0.4242) | info on Rv1940/ribA1 |
Correlation of Rv3015c/- with Rv2095c/pafC
Normalized LFCs for Rv3015c/-:
(description and provenance of datasets)
| Rv3015c/- | Rv2095c/pafC | |
| Fe_supp_jason_reseq | 1.195 | 1.066 |
| low_pH_jason_reseq | -1.154 | -0.417 |
| NO_jason_reseq | -0.575 | 0.186 |
| B6_jason_reseq | -0.73 | 0.492 |
| MHCII_jason_reseq | 0.831 | 0.225 |
| Isoniazid02 | -1.353 | -0.681 |
| Rifampicin4 | -0.49 | -1.267 |
| Ethambutol3 | -1.071 | -0.552 |
| Meropenem3 | -1.027 | -1.248 |
| Vancomycin16 | -1.027 | -1.26 |
| Rv2680_day32 | 0.134 | 0.031 |
| H37Rv_KO_MarP | 0.337 | -0.134 |
| hypoxia_3wks | -0.447 | -0.658 |
| hypoxia_6wks | -0.793 | -0.345 |
| glycerol | 0.524 | 0.986 |
| cholesterol | 0.716 | 2.704 |
| AJ | 0.193 | 0.188 |
| Bibs02 | -0.446 | -0.079 |
| Bibs02c | -0.344 | -0.026 |
| BL6 | -1.52 | -0.556 |
| BL6a | -0.277 | -0.073 |
| BXD01 | -0.043 | -0.194 |
| BXD010 | -1.24 | -0.501 |
| BXD011 | -1.165 | -0.217 |
| BXD03 | -0.091 | -0.269 |
| BXD04 | -0.445 | -0.495 |
| BXD05 | 0.191 | -0.288 |
| BXD06 | -0.967 | -0.778 |
| BXD07 | -0.264 | -0.317 |
| BXD08 | 0.629 | -0.246 |
| BXD09 | -0.343 | -0.477 |
| CAST | 0.37 | -0.113 |
| CCcont | -0.471 | -0.223 |
| DS01 | 0.402 | 0.014 |
| DS02 | 0.37 | 0.647 |
| DS04 | 1.217 | 0.125 |
| DS0c | 1.158 | 0.077 |
| GP01 | -0.126 | -0.107 |
| GP02 | 1.115 | 0.406 |
| GP0c | -0.616 | 0.416 |
| NOD | 1.17 | 0.586 |
| NZO | -0.571 | -0.049 |
| PWK | -0.479 | -0.011 |
| H37Rv_KO_CtpC | 0.12 | 0.058 |
| H37Rv_KO_CtpD | -1.003 | -0.473 |
| H37Rv_KO_Rv1272 | 0.824 | 0.327 |
| H37Rv_KO_SugABC | 0.591 | 0.281 |
| H37Rv_KO_MbtN | 0.044 | -0.601 |
| Trans05 | -0.491 | -0.081 |
| macrophage_unactivated | -0.505 | -0.259 |
| IL1 | 0.863 | -0.406 |
| Rapamycin | 0.058 | -1.571 |
| Tcell | -1.352 | -0.267 |
| GMCSF | 1.611 | -0.694 |
| IFNab | 0.834 | -0.481 |
| IFNg | -0.545 | -1.109 |
| IFNg_GMCSF1 | 0.346 | -0.465 |
| Rv1432_day32 | -0.318 | -0.138 |
| Rv1565c_day32 | -0.526 | -0.178 |
| secA2_input | 0.094 | 0.496 |
| delta_Rv3594 | 0.635 | 0.251 |
| delta_Rv3717 | 0.927 | 0.439 |
| delta_Rv3811 | 1.291 | 0.178 |
| delta_Rv0954 | 0.746 | 0.459 |
| PonA1 | 1.829 | -0.406 |
| EccD1_KO | -1.302 | -0.237 |
| EspI_KO | 0.0 | 0.048 |
| PE35_KO | 0.697 | 0.201 |
| PPE68_KO | -0.141 | 0.019 |
| glycerol2 | -0.354 | -0.849 |
| lignocerate | -1.404 | -0.869 |
| oleate | 0.041 | -0.688 |
| phosphatidylcholine | -0.65 | -0.245 |
| acetate | -0.622 | -0.698 |
| glucAc | -1.819 | -0.289 |
| Rv0950ko | -0.856 | 0.606 |
| Rv1096ko | 0.395 | 0.57 |
| Rv3684ko | 0.727 | 0.599 |
| delta_otsA_trehalose | 1.887 | 1.326 |