Top 10 genes with highest correlation to Rv3015c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2458/mmuM | (cc=0.5354) | info on Rv2458/mmuM |
| Rv0307c/- | (cc=0.4707) | info on Rv0307c/- |
| Rv2066/cobI | (cc=0.4689) | info on Rv2066/cobI |
| Rv2095c/pafC | (cc=0.4679) | info on Rv2095c/pafC |
| Rv2601/speE | (cc=0.4595) | info on Rv2601/speE |
| Rv0999/- | (cc=0.4331) | info on Rv0999/- |
| Rv3283/sseA | (cc=0.428) | info on Rv3283/sseA |
| Rv2489c/- | (cc=0.4273) | info on Rv2489c/- |
| Rv3414c/sigD | (cc=0.4265) | info on Rv3414c/sigD |
| Rv1940/ribA1 | (cc=0.4242) | info on Rv1940/ribA1 |
Correlation of Rv3015c/- with Rv1940/ribA1
Normalized LFCs for Rv3015c/-:
(description and provenance of datasets)
| Rv3015c/- | Rv1940/ribA1 | |
| Fe_supp_jason_reseq | 1.195 | -0.242 |
| low_pH_jason_reseq | -1.154 | -0.478 |
| NO_jason_reseq | -0.575 | 0.693 |
| B6_jason_reseq | -0.73 | 0.547 |
| MHCII_jason_reseq | 0.831 | 0.377 |
| Isoniazid02 | -1.353 | 0.34 |
| Rifampicin4 | -0.49 | -0.076 |
| Ethambutol3 | -1.071 | -0.173 |
| Meropenem3 | -1.027 | 0.137 |
| Vancomycin16 | -1.027 | -0.294 |
| Rv2680_day32 | 0.134 | 0.15 |
| H37Rv_KO_MarP | 0.337 | -0.395 |
| hypoxia_3wks | -0.447 | 0.319 |
| hypoxia_6wks | -0.793 | -0.054 |
| glycerol | 0.524 | -0.151 |
| cholesterol | 0.716 | 0.955 |
| AJ | 0.193 | 0.526 |
| Bibs02 | -0.446 | 0.97 |
| Bibs02c | -0.344 | -0.729 |
| BL6 | -1.52 | -1.835 |
| BL6a | -0.277 | -1.185 |
| BXD01 | -0.043 | -0.377 |
| BXD010 | -1.24 | -2.104 |
| BXD011 | -1.165 | -1.335 |
| BXD03 | -0.091 | -1.162 |
| BXD04 | -0.445 | -1.644 |
| BXD05 | 0.191 | -1.493 |
| BXD06 | -0.967 | -1.094 |
| BXD07 | -0.264 | -1.309 |
| BXD08 | 0.629 | -0.287 |
| BXD09 | -0.343 | -0.954 |
| CAST | 0.37 | 0.058 |
| CCcont | -0.471 | -2.403 |
| DS01 | 0.402 | -0.009 |
| DS02 | 0.37 | 0.145 |
| DS04 | 1.217 | 0.87 |
| DS0c | 1.158 | 0.793 |
| GP01 | -0.126 | -0.597 |
| GP02 | 1.115 | 1.119 |
| GP0c | -0.616 | -0.651 |
| NOD | 1.17 | 0.47 |
| NZO | -0.571 | 0.0 |
| PWK | -0.479 | -0.155 |
| H37Rv_KO_CtpC | 0.12 | -0.047 |
| H37Rv_KO_CtpD | -1.003 | -1.751 |
| H37Rv_KO_Rv1272 | 0.824 | -1.875 |
| H37Rv_KO_SugABC | 0.591 | -1.902 |
| H37Rv_KO_MbtN | 0.044 | -0.912 |
| Trans05 | -0.491 | 0.549 |
| macrophage_unactivated | -0.505 | -0.237 |
| IL1 | 0.863 | 0.279 |
| Rapamycin | 0.058 | 0.687 |
| Tcell | -1.352 | -0.414 |
| GMCSF | 1.611 | 1.555 |
| IFNab | 0.834 | 0.771 |
| IFNg | -0.545 | -0.064 |
| IFNg_GMCSF1 | 0.346 | 0.801 |
| Rv1432_day32 | -0.318 | -0.709 |
| Rv1565c_day32 | -0.526 | 0.014 |
| secA2_input | 0.094 | -0.102 |
| delta_Rv3594 | 0.635 | 0.223 |
| delta_Rv3717 | 0.927 | 0.433 |
| delta_Rv3811 | 1.291 | 0.314 |
| delta_Rv0954 | 0.746 | -0.141 |
| PonA1 | 1.829 | 0.731 |
| EccD1_KO | -1.302 | -0.477 |
| EspI_KO | 0.0 | -0.585 |
| PE35_KO | 0.697 | -0.079 |
| PPE68_KO | -0.141 | 0.186 |
| glycerol2 | -0.354 | 0.294 |
| lignocerate | -1.404 | -0.245 |
| oleate | 0.041 | 0.98 |
| phosphatidylcholine | -0.65 | 0.773 |
| acetate | -0.622 | -0.213 |
| glucAc | -1.819 | -1.081 |
| Rv0950ko | -0.856 | -0.736 |
| Rv1096ko | 0.395 | 0.63 |
| Rv3684ko | 0.727 | -0.498 |
| delta_otsA_trehalose | 1.887 | 0.345 |