Top 10 genes with highest correlation to Rv2989/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3057c/- | (cc=0.7509) | info on Rv3057c/- |
| Rv3197/- | (cc=0.6924) | info on Rv3197/- |
| Rv0190/- | (cc=0.6803) | info on Rv0190/- |
| Rv1193/fadD36 | (cc=0.6549) | info on Rv1193/fadD36 |
| Rv1589/bioB | (cc=0.6413) | info on Rv1589/bioB |
| Rv0391/metZ | (cc=0.6411) | info on Rv0391/metZ |
| Rv1568/bioA | (cc=0.636) | info on Rv1568/bioA |
| Rv2605c/tesB2 | (cc=0.631) | info on Rv2605c/tesB2 |
| Rv1273c/- | (cc=0.6281) | info on Rv1273c/- |
| Rv2091c/- | (cc=0.6244) | info on Rv2091c/- |
Correlation of Rv2989/- with Rv3197/-
Normalized LFCs for Rv2989/-:
(description and provenance of datasets)
| Rv2989/- | Rv3197/- | |
| Fe_supp_jason_reseq | 3.044 | 0.865 |
| low_pH_jason_reseq | -1.673 | -1.295 |
| NO_jason_reseq | -3.071 | 0.407 |
| B6_jason_reseq | -1.298 | -1.729 |
| MHCII_jason_reseq | -1.806 | -1.339 |
| Isoniazid02 | -1.534 | 1.461 |
| Rifampicin4 | 0.141 | -1.424 |
| Ethambutol3 | 2.022 | 0.062 |
| Meropenem3 | 0.902 | 1.488 |
| Vancomycin16 | 0.65 | -0.759 |
| Rv2680_day32 | -2.939 | -1.588 |
| H37Rv_KO_MarP | -1.521 | 0.938 |
| hypoxia_3wks | -2.054 | -0.754 |
| hypoxia_6wks | -2.76 | -0.883 |
| glycerol | -3.397 | -0.784 |
| cholesterol | -3.158 | -0.354 |
| AJ | -4.686 | -1.992 |
| Bibs02 | -1.534 | -0.815 |
| Bibs02c | -3.675 | -2.495 |
| BL6 | -3.258 | -1.298 |
| BL6a | -4.84 | -2.303 |
| BXD01 | -3.64 | -2.047 |
| BXD010 | -3.579 | -1.567 |
| BXD011 | -3.56 | -1.241 |
| BXD03 | -3.779 | -1.302 |
| BXD04 | -3.456 | -1.917 |
| BXD05 | -3.761 | -1.976 |
| BXD06 | -3.597 | -2.157 |
| BXD07 | -3.87 | -2.006 |
| BXD08 | -3.717 | -1.852 |
| BXD09 | -3.927 | -1.931 |
| CAST | -3.714 | -2.054 |
| CCcont | -2.131 | -0.78 |
| DS01 | -3.179 | -2.483 |
| DS02 | -3.044 | -1.336 |
| DS04 | -3.733 | -1.753 |
| DS0c | -4.173 | -1.614 |
| GP01 | -2.759 | 0.024 |
| GP02 | -2.325 | -0.025 |
| GP0c | -3.634 | -0.776 |
| NOD | -3.023 | -0.952 |
| NZO | -4.13 | -2.319 |
| PWK | -2.914 | -1.684 |
| H37Rv_KO_CtpC | -0.035 | -0.773 |
| H37Rv_KO_CtpD | 0.587 | 0.23 |
| H37Rv_KO_Rv1272 | -3.941 | -1.34 |
| H37Rv_KO_SugABC | -2.349 | -0.248 |
| H37Rv_KO_MbtN | -1.734 | -1.168 |
| Trans05 | -3.652 | -1.39 |
| macrophage_unactivated | -0.259 | 0.672 |
| IL1 | 1.32 | 0.389 |
| Rapamycin | 0.577 | 0.338 |
| Tcell | 3.812 | 0.756 |
| GMCSF | -0.57 | 0.665 |
| IFNab | -0.381 | -0.36 |
| IFNg | 0.0 | 0.433 |
| IFNg_GMCSF1 | -1.474 | 0.606 |
| Rv1432_day32 | -4.963 | -1.119 |
| Rv1565c_day32 | -0.599 | -1.091 |
| secA2_input | 0.266 | 0.899 |
| delta_Rv3594 | -2.857 | -0.098 |
| delta_Rv3717 | -3.132 | -1.888 |
| delta_Rv3811 | -2.134 | -0.617 |
| delta_Rv0954 | -1.168 | 0.69 |
| PonA1 | 0.023 | 1.238 |
| EccD1_KO | 0.589 | 0.201 |
| EspI_KO | -0.673 | 0.479 |
| PE35_KO | 0.726 | 0.128 |
| PPE68_KO | -0.086 | 0.166 |
| glycerol2 | -1.749 | -0.254 |
| lignocerate | -2.177 | 0.335 |
| oleate | -2.535 | -0.176 |
| phosphatidylcholine | -0.766 | 0.634 |
| acetate | 0.296 | -0.246 |
| glucAc | 0.578 | -0.145 |
| Rv0950ko | 0.425 | 1.173 |
| Rv1096ko | -1.252 | 0.953 |
| Rv3684ko | -1.847 | 0.36 |
| delta_otsA_trehalose | -3.01 | 0.446 |