Top 10 genes with highest correlation to Rv2989/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3057c/- | (cc=0.7509) | info on Rv3057c/- |
| Rv3197/- | (cc=0.6924) | info on Rv3197/- |
| Rv0190/- | (cc=0.6803) | info on Rv0190/- |
| Rv1193/fadD36 | (cc=0.6549) | info on Rv1193/fadD36 |
| Rv1589/bioB | (cc=0.6413) | info on Rv1589/bioB |
| Rv0391/metZ | (cc=0.6411) | info on Rv0391/metZ |
| Rv1568/bioA | (cc=0.636) | info on Rv1568/bioA |
| Rv2605c/tesB2 | (cc=0.631) | info on Rv2605c/tesB2 |
| Rv1273c/- | (cc=0.6281) | info on Rv1273c/- |
| Rv2091c/- | (cc=0.6244) | info on Rv2091c/- |
Correlation of Rv2989/- with Rv0190/-
Normalized LFCs for Rv2989/-:
(description and provenance of datasets)
| Rv2989/- | Rv0190/- | |
| Fe_supp_jason_reseq | 3.044 | 3.343 |
| low_pH_jason_reseq | -1.673 | -0.417 |
| NO_jason_reseq | -3.071 | -0.189 |
| B6_jason_reseq | -1.298 | 0.219 |
| MHCII_jason_reseq | -1.806 | -1.92 |
| Isoniazid02 | -1.534 | -2.708 |
| Rifampicin4 | 0.141 | 0.046 |
| Ethambutol3 | 2.022 | -0.479 |
| Meropenem3 | 0.902 | 0.736 |
| Vancomycin16 | 0.65 | -0.923 |
| Rv2680_day32 | -2.939 | -2.322 |
| H37Rv_KO_MarP | -1.521 | -0.701 |
| hypoxia_3wks | -2.054 | -1.95 |
| hypoxia_6wks | -2.76 | -0.349 |
| glycerol | -3.397 | -1.024 |
| cholesterol | -3.158 | -2.25 |
| AJ | -4.686 | -5.593 |
| Bibs02 | -1.534 | -5.141 |
| Bibs02c | -3.675 | -3.794 |
| BL6 | -3.258 | -2.372 |
| BL6a | -4.84 | -3.645 |
| BXD01 | -3.64 | -2.362 |
| BXD010 | -3.579 | -3.899 |
| BXD011 | -3.56 | -2.848 |
| BXD03 | -3.779 | -1.208 |
| BXD04 | -3.456 | -2.458 |
| BXD05 | -3.761 | -2.27 |
| BXD06 | -3.597 | -2.189 |
| BXD07 | -3.87 | -3.551 |
| BXD08 | -3.717 | -3.029 |
| BXD09 | -3.927 | -3.035 |
| CAST | -3.714 | -3.482 |
| CCcont | -2.131 | -0.227 |
| DS01 | -3.179 | -4.041 |
| DS02 | -3.044 | -4.392 |
| DS04 | -3.733 | -1.255 |
| DS0c | -4.173 | -3.414 |
| GP01 | -2.759 | -3.194 |
| GP02 | -2.325 | -2.692 |
| GP0c | -3.634 | -3.568 |
| NOD | -3.023 | -1.616 |
| NZO | -4.13 | -6.0 |
| PWK | -2.914 | -5.972 |
| H37Rv_KO_CtpC | -0.035 | 0.746 |
| H37Rv_KO_CtpD | 0.587 | -1.413 |
| H37Rv_KO_Rv1272 | -3.941 | -3.099 |
| H37Rv_KO_SugABC | -2.349 | -0.487 |
| H37Rv_KO_MbtN | -1.734 | 0.22 |
| Trans05 | -3.652 | -2.773 |
| macrophage_unactivated | -0.259 | 0.098 |
| IL1 | 1.32 | -1.486 |
| Rapamycin | 0.577 | -0.509 |
| Tcell | 3.812 | 2.203 |
| GMCSF | -0.57 | -1.502 |
| IFNab | -0.381 | -1.793 |
| IFNg | 0.0 | -0.54 |
| IFNg_GMCSF1 | -1.474 | -0.987 |
| Rv1432_day32 | -4.963 | -5.743 |
| Rv1565c_day32 | -0.599 | -2.011 |
| secA2_input | 0.266 | -0.775 |
| delta_Rv3594 | -2.857 | -1.811 |
| delta_Rv3717 | -3.132 | -1.032 |
| delta_Rv3811 | -2.134 | -1.524 |
| delta_Rv0954 | -1.168 | -0.092 |
| PonA1 | 0.023 | 0.534 |
| EccD1_KO | 0.589 | -1.638 |
| EspI_KO | -0.673 | -2.493 |
| PE35_KO | 0.726 | -0.537 |
| PPE68_KO | -0.086 | -0.022 |
| glycerol2 | -1.749 | -3.834 |
| lignocerate | -2.177 | -3.114 |
| oleate | -2.535 | -4.388 |
| phosphatidylcholine | -0.766 | -2.787 |
| acetate | 0.296 | -0.864 |
| glucAc | 0.578 | -0.64 |
| Rv0950ko | 0.425 | 0.838 |
| Rv1096ko | -1.252 | -0.685 |
| Rv3684ko | -1.847 | 0.449 |
| delta_otsA_trehalose | -3.01 | -0.116 |