Top 10 genes with highest correlation to Rv2989/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3057c/- | (cc=0.7509) | info on Rv3057c/- |
| Rv3197/- | (cc=0.6924) | info on Rv3197/- |
| Rv0190/- | (cc=0.6803) | info on Rv0190/- |
| Rv1193/fadD36 | (cc=0.6549) | info on Rv1193/fadD36 |
| Rv1589/bioB | (cc=0.6413) | info on Rv1589/bioB |
| Rv0391/metZ | (cc=0.6411) | info on Rv0391/metZ |
| Rv1568/bioA | (cc=0.636) | info on Rv1568/bioA |
| Rv2605c/tesB2 | (cc=0.631) | info on Rv2605c/tesB2 |
| Rv1273c/- | (cc=0.6281) | info on Rv1273c/- |
| Rv2091c/- | (cc=0.6244) | info on Rv2091c/- |
Correlation of Rv2989/- with Rv0391/metZ
Normalized LFCs for Rv2989/-:
(description and provenance of datasets)
| Rv2989/- | Rv0391/metZ | |
| Fe_supp_jason_reseq | 3.044 | -1.075 |
| low_pH_jason_reseq | -1.673 | -0.35 |
| NO_jason_reseq | -3.071 | -0.265 |
| B6_jason_reseq | -1.298 | -2.065 |
| MHCII_jason_reseq | -1.806 | -2.712 |
| Isoniazid02 | -1.534 | -1.052 |
| Rifampicin4 | 0.141 | 0.36 |
| Ethambutol3 | 2.022 | -1.009 |
| Meropenem3 | 0.902 | -1.689 |
| Vancomycin16 | 0.65 | -0.512 |
| Rv2680_day32 | -2.939 | -3.196 |
| H37Rv_KO_MarP | -1.521 | -0.334 |
| hypoxia_3wks | -2.054 | -1.918 |
| hypoxia_6wks | -2.76 | -1.075 |
| glycerol | -3.397 | -3.065 |
| cholesterol | -3.158 | -4.165 |
| AJ | -4.686 | -1.814 |
| Bibs02 | -1.534 | -2.42 |
| Bibs02c | -3.675 | -2.986 |
| BL6 | -3.258 | -1.898 |
| BL6a | -4.84 | -3.204 |
| BXD01 | -3.64 | -2.411 |
| BXD010 | -3.579 | -1.463 |
| BXD011 | -3.56 | -2.741 |
| BXD03 | -3.779 | -1.376 |
| BXD04 | -3.456 | -2.067 |
| BXD05 | -3.761 | -1.781 |
| BXD06 | -3.597 | -2.268 |
| BXD07 | -3.87 | -2.809 |
| BXD08 | -3.717 | -1.498 |
| BXD09 | -3.927 | -2.555 |
| CAST | -3.714 | -2.75 |
| CCcont | -2.131 | -1.498 |
| DS01 | -3.179 | -2.236 |
| DS02 | -3.044 | -2.379 |
| DS04 | -3.733 | -2.645 |
| DS0c | -4.173 | -2.145 |
| GP01 | -2.759 | -0.581 |
| GP02 | -2.325 | -0.884 |
| GP0c | -3.634 | -1.304 |
| NOD | -3.023 | -0.155 |
| NZO | -4.13 | -2.719 |
| PWK | -2.914 | -2.674 |
| H37Rv_KO_CtpC | -0.035 | -1.27 |
| H37Rv_KO_CtpD | 0.587 | -1.953 |
| H37Rv_KO_Rv1272 | -3.941 | -2.755 |
| H37Rv_KO_SugABC | -2.349 | -0.382 |
| H37Rv_KO_MbtN | -1.734 | -1.286 |
| Trans05 | -3.652 | -2.701 |
| macrophage_unactivated | -0.259 | -0.243 |
| IL1 | 1.32 | 1.305 |
| Rapamycin | 0.577 | -0.488 |
| Tcell | 3.812 | 1.698 |
| GMCSF | -0.57 | -1.064 |
| IFNab | -0.381 | -0.523 |
| IFNg | 0.0 | 0.099 |
| IFNg_GMCSF1 | -1.474 | -1.062 |
| Rv1432_day32 | -4.963 | -3.707 |
| Rv1565c_day32 | -0.599 | -2.504 |
| secA2_input | 0.266 | 0.307 |
| delta_Rv3594 | -2.857 | -1.055 |
| delta_Rv3717 | -3.132 | -1.128 |
| delta_Rv3811 | -2.134 | -1.268 |
| delta_Rv0954 | -1.168 | -0.491 |
| PonA1 | 0.023 | 0.465 |
| EccD1_KO | 0.589 | 0.0 |
| EspI_KO | -0.673 | -0.588 |
| PE35_KO | 0.726 | -0.715 |
| PPE68_KO | -0.086 | -0.221 |
| glycerol2 | -1.749 | 0.422 |
| lignocerate | -2.177 | -0.044 |
| oleate | -2.535 | -0.129 |
| phosphatidylcholine | -0.766 | -0.076 |
| acetate | 0.296 | -0.09 |
| glucAc | 0.578 | -0.623 |
| Rv0950ko | 0.425 | 0.157 |
| Rv1096ko | -1.252 | 0.422 |
| Rv3684ko | -1.847 | -0.458 |
| delta_otsA_trehalose | -3.01 | 0.161 |