Top 10 genes with highest correlation to Rv2989/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3057c/- | (cc=0.7509) | info on Rv3057c/- |
| Rv3197/- | (cc=0.6924) | info on Rv3197/- |
| Rv0190/- | (cc=0.6803) | info on Rv0190/- |
| Rv1193/fadD36 | (cc=0.6549) | info on Rv1193/fadD36 |
| Rv1589/bioB | (cc=0.6413) | info on Rv1589/bioB |
| Rv0391/metZ | (cc=0.6411) | info on Rv0391/metZ |
| Rv1568/bioA | (cc=0.636) | info on Rv1568/bioA |
| Rv2605c/tesB2 | (cc=0.631) | info on Rv2605c/tesB2 |
| Rv1273c/- | (cc=0.6281) | info on Rv1273c/- |
| Rv2091c/- | (cc=0.6244) | info on Rv2091c/- |
Correlation of Rv2989/- with Rv1568/bioA
Normalized LFCs for Rv2989/-:
(description and provenance of datasets)
| Rv2989/- | Rv1568/bioA | |
| Fe_supp_jason_reseq | 3.044 | 0.395 |
| low_pH_jason_reseq | -1.673 | -0.239 |
| NO_jason_reseq | -3.071 | 0.239 |
| B6_jason_reseq | -1.298 | -4.106 |
| MHCII_jason_reseq | -1.806 | -3.512 |
| Isoniazid02 | -1.534 | 0.215 |
| Rifampicin4 | 0.141 | 0.401 |
| Ethambutol3 | 2.022 | -0.377 |
| Meropenem3 | 0.902 | -0.265 |
| Vancomycin16 | 0.65 | 0.127 |
| Rv2680_day32 | -2.939 | -3.765 |
| H37Rv_KO_MarP | -1.521 | -0.202 |
| hypoxia_3wks | -2.054 | 0.427 |
| hypoxia_6wks | -2.76 | 0.098 |
| glycerol | -3.397 | -6.0 |
| cholesterol | -3.158 | -4.527 |
| AJ | -4.686 | -6.0 |
| Bibs02 | -1.534 | -5.898 |
| Bibs02c | -3.675 | -6.0 |
| BL6 | -3.258 | -4.035 |
| BL6a | -4.84 | -6.0 |
| BXD01 | -3.64 | -4.071 |
| BXD010 | -3.579 | -4.003 |
| BXD011 | -3.56 | -3.121 |
| BXD03 | -3.779 | -3.185 |
| BXD04 | -3.456 | -3.754 |
| BXD05 | -3.761 | -3.771 |
| BXD06 | -3.597 | -4.306 |
| BXD07 | -3.87 | -4.328 |
| BXD08 | -3.717 | -4.157 |
| BXD09 | -3.927 | -4.533 |
| CAST | -3.714 | -5.642 |
| CCcont | -2.131 | -1.046 |
| DS01 | -3.179 | -6.0 |
| DS02 | -3.044 | -6.0 |
| DS04 | -3.733 | -4.659 |
| DS0c | -4.173 | -6.0 |
| GP01 | -2.759 | -2.637 |
| GP02 | -2.325 | -2.331 |
| GP0c | -3.634 | 0.031 |
| NOD | -3.023 | -4.914 |
| NZO | -4.13 | -6.0 |
| PWK | -2.914 | -5.789 |
| H37Rv_KO_CtpC | -0.035 | -4.242 |
| H37Rv_KO_CtpD | 0.587 | -2.771 |
| H37Rv_KO_Rv1272 | -3.941 | -3.683 |
| H37Rv_KO_SugABC | -2.349 | -1.29 |
| H37Rv_KO_MbtN | -1.734 | -0.066 |
| Trans05 | -3.652 | -3.755 |
| macrophage_unactivated | -0.259 | 1.471 |
| IL1 | 1.32 | -0.415 |
| Rapamycin | 0.577 | 0.598 |
| Tcell | 3.812 | 1.554 |
| GMCSF | -0.57 | 0.906 |
| IFNab | -0.381 | 2.6 |
| IFNg | 0.0 | -1.042 |
| IFNg_GMCSF1 | -1.474 | -0.547 |
| Rv1432_day32 | -4.963 | -4.919 |
| Rv1565c_day32 | -0.599 | -6.0 |
| secA2_input | 0.266 | 0.593 |
| delta_Rv3594 | -2.857 | 0.289 |
| delta_Rv3717 | -3.132 | 0.569 |
| delta_Rv3811 | -2.134 | 0.196 |
| delta_Rv0954 | -1.168 | 0.979 |
| PonA1 | 0.023 | 0.6 |
| EccD1_KO | 0.589 | 0.178 |
| EspI_KO | -0.673 | -0.285 |
| PE35_KO | 0.726 | -0.376 |
| PPE68_KO | -0.086 | -0.685 |
| glycerol2 | -1.749 | 0.0 |
| lignocerate | -2.177 | 1.303 |
| oleate | -2.535 | 0.0 |
| phosphatidylcholine | -0.766 | 0.819 |
| acetate | 0.296 | 0.437 |
| glucAc | 0.578 | 0.0 |
| Rv0950ko | 0.425 | 0.7 |
| Rv1096ko | -1.252 | 0.872 |
| Rv3684ko | -1.847 | 0.76 |
| delta_otsA_trehalose | -3.01 | -0.65 |