Top 10 genes with highest correlation to Rv2983/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3262/fbiB | (cc=0.7653) | info on Rv3262/fbiB |
| Rv1173/fbiC | (cc=0.745) | info on Rv1173/fbiC |
| Rv3624c/hpt | (cc=0.7214) | info on Rv3624c/hpt |
| Rv1324/- | (cc=0.7073) | info on Rv1324/- |
| Rv0860/fadB | (cc=0.6573) | info on Rv0860/fadB |
| Rv3228/- | (cc=0.63) | info on Rv3228/- |
| Rv2909c/rpsP | (cc=0.6228) | info on Rv2909c/rpsP |
| Rv0526/- | (cc=0.6198) | info on Rv0526/- |
| Rv3261/fbiA | (cc=0.6164) | info on Rv3261/fbiA |
| Rv1170/mshB | (cc=0.5863) | info on Rv1170/mshB |
Correlation of Rv2983/- with Rv0860/fadB
Normalized LFCs for Rv2983/-:
(description and provenance of datasets)
| Rv2983/- | Rv0860/fadB | |
| Fe_supp_jason_reseq | 0.218 | -0.38 |
| low_pH_jason_reseq | 0.0 | -0.403 |
| NO_jason_reseq | 0.0 | -0.302 |
| B6_jason_reseq | 0.292 | -0.421 |
| MHCII_jason_reseq | 0.135 | -0.37 |
| Isoniazid02 | 2.89 | 2.041 |
| Rifampicin4 | 2.142 | 0.712 |
| Ethambutol3 | 1.249 | 2.004 |
| Meropenem3 | 0.189 | 0.379 |
| Vancomycin16 | 2.183 | -0.175 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 1.112 | 0.0 |
| hypoxia_3wks | -0.502 | 0.347 |
| hypoxia_6wks | -0.549 | -0.194 |
| glycerol | 0.856 | 1.647 |
| cholesterol | 1.504 | 1.468 |
| AJ | 0.232 | 0.0 |
| Bibs02 | 0.0 | 0.592 |
| Bibs02c | 0.209 | 0.0 |
| BL6 | 0.0 | -0.125 |
| BL6a | 0.0 | 0.181 |
| BXD01 | 0.0 | -0.13 |
| BXD010 | 0.0 | -0.128 |
| BXD011 | 0.0 | -0.127 |
| BXD03 | 0.0 | -0.135 |
| BXD04 | 0.0 | -0.124 |
| BXD05 | 0.135 | -0.135 |
| BXD06 | 0.133 | 0.0 |
| BXD07 | 0.0 | -0.138 |
| BXD08 | 0.0 | -0.133 |
| BXD09 | 0.0 | -0.14 |
| CAST | 0.0 | 0.0 |
| CCcont | 1.082 | 1.617 |
| DS01 | 1.947 | 2.123 |
| DS02 | 0.0 | 0.548 |
| DS04 | 0.194 | 0.883 |
| DS0c | 0.596 | 2.349 |
| GP01 | 0.0 | -0.099 |
| GP02 | 0.0 | -0.083 |
| GP0c | 0.0 | -0.13 |
| NOD | 0.0 | 0.205 |
| NZO | 0.0 | -0.199 |
| PWK | 0.0 | -0.196 |
| H37Rv_KO_CtpC | 0.0 | 0.148 |
| H37Rv_KO_CtpD | 0.127 | 0.0 |
| H37Rv_KO_Rv1272 | 0.0 | 0.0 |
| H37Rv_KO_SugABC | 0.099 | 0.509 |
| H37Rv_KO_MbtN | 0.0 | 1.335 |
| Trans05 | 0.0 | -0.131 |
| macrophage_unactivated | 0.0 | 0.65 |
| IL1 | 0.0 | -0.341 |
| Rapamycin | 0.0 | -0.353 |
| Tcell | 0.0 | 0.0 |
| GMCSF | 0.0 | 0.283 |
| IFNab | 0.0 | -0.348 |
| IFNg | 0.0 | -0.644 |
| IFNg_GMCSF1 | 0.0 | -0.757 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.415 |
| secA2_input | -0.485 | -0.429 |
| delta_Rv3594 | 1.811 | 1.297 |
| delta_Rv3717 | 0.0 | 0.0 |
| delta_Rv3811 | 0.934 | 1.181 |
| delta_Rv0954 | 0.811 | 1.875 |
| PonA1 | 1.367 | -0.238 |
| EccD1_KO | -0.664 | 0.168 |
| EspI_KO | -1.243 | 1.146 |
| PE35_KO | 1.52 | 1.059 |
| PPE68_KO | 1.667 | 0.32 |
| glycerol2 | -1.297 | -0.914 |
| lignocerate | -2.345 | -1.218 |
| oleate | -2.358 | -2.836 |
| phosphatidylcholine | -2.697 | -1.311 |
| acetate | -1.102 | -0.482 |
| glucAc | -1.49 | -0.18 |
| Rv0950ko | -1.294 | -1.936 |
| Rv1096ko | -0.256 | -1.764 |
| Rv3684ko | -0.727 | -1.241 |
| delta_otsA_trehalose | -0.111 | -1.883 |