Top 10 genes with highest correlation to Rv2901c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1348/irtA | (cc=0.5873) | info on Rv1348/irtA |
| Rv0418/lpqL | (cc=0.5732) | info on Rv0418/lpqL |
| Rv1592c/- | (cc=0.5682) | info on Rv1592c/- |
| Rv3574/kstR | (cc=0.5482) | info on Rv3574/kstR |
| Rv0406c/- | (cc=0.5421) | info on Rv0406c/- |
| Rv2795c/- | (cc=0.5393) | info on Rv2795c/- |
| Rv2782c/pepR | (cc=0.534) | info on Rv2782c/pepR |
| Rv2239c/- | (cc=0.5327) | info on Rv2239c/- |
| Rv3412/- | (cc=0.5325) | info on Rv3412/- |
| Rv2564/glnQ | (cc=0.5188) | info on Rv2564/glnQ |
Correlation of Rv2901c/- with Rv3574/kstR
Normalized LFCs for Rv2901c/-:
(description and provenance of datasets)
| Rv2901c/- | Rv3574/kstR | |
| Fe_supp_jason_reseq | 0.36 | 0.63 |
| low_pH_jason_reseq | 0.837 | 0.107 |
| NO_jason_reseq | -0.958 | -1.993 |
| B6_jason_reseq | -0.365 | -1.263 |
| MHCII_jason_reseq | 0.394 | -0.977 |
| Isoniazid02 | -0.272 | -1.085 |
| Rifampicin4 | -1.186 | 0.219 |
| Ethambutol3 | -0.795 | -0.333 |
| Meropenem3 | 1.353 | -0.068 |
| Vancomycin16 | -0.496 | -0.639 |
| Rv2680_day32 | -2.508 | -1.625 |
| H37Rv_KO_MarP | -1.937 | 0.154 |
| hypoxia_3wks | -2.253 | -1.87 |
| hypoxia_6wks | -0.689 | -1.483 |
| glycerol | -1.668 | 0.721 |
| cholesterol | -0.2 | -0.31 |
| AJ | -1.047 | -1.269 |
| Bibs02 | 0.461 | -1.715 |
| Bibs02c | -0.776 | -1.963 |
| BL6 | -1.492 | -1.298 |
| BL6a | -1.636 | -1.512 |
| BXD01 | -1.189 | -1.222 |
| BXD010 | -1.186 | -1.329 |
| BXD011 | -2.006 | -0.782 |
| BXD03 | -1.2 | -1.404 |
| BXD04 | -1.495 | -1.16 |
| BXD05 | -1.651 | -1.397 |
| BXD06 | -1.709 | -1.131 |
| BXD07 | -1.161 | -1.299 |
| BXD08 | -2.127 | -1.381 |
| BXD09 | -1.435 | -1.318 |
| CAST | -1.238 | -1.582 |
| CCcont | -0.066 | 0.533 |
| DS01 | -0.652 | -0.867 |
| DS02 | -0.725 | -1.051 |
| DS04 | 0.082 | -0.325 |
| DS0c | 0.058 | 1.001 |
| GP01 | -2.114 | -1.025 |
| GP02 | -1.567 | -0.864 |
| GP0c | -1.955 | -1.35 |
| NOD | 0.818 | -0.591 |
| NZO | -2.446 | -1.691 |
| PWK | -1.62 | -1.205 |
| H37Rv_KO_CtpC | -1.422 | -1.24 |
| H37Rv_KO_CtpD | 0.84 | -0.465 |
| H37Rv_KO_Rv1272 | -0.992 | -1.323 |
| H37Rv_KO_SugABC | -1.866 | -1.028 |
| H37Rv_KO_MbtN | -2.207 | -0.787 |
| Trans05 | -0.691 | -1.226 |
| macrophage_unactivated | -0.164 | 0.363 |
| IL1 | 0.122 | -0.78 |
| Rapamycin | 0.807 | -0.807 |
| Tcell | 0.261 | 0.0 |
| GMCSF | -1.133 | -0.694 |
| IFNab | -1.557 | -0.795 |
| IFNg | -1.494 | -0.337 |
| IFNg_GMCSF1 | -1.618 | -0.396 |
| Rv1432_day32 | -2.562 | -1.106 |
| Rv1565c_day32 | -0.599 | -0.981 |
| secA2_input | -0.551 | -0.551 |
| delta_Rv3594 | -2.729 | -2.709 |
| delta_Rv3717 | -3.844 | -3.019 |
| delta_Rv3811 | -2.913 | -2.763 |
| delta_Rv0954 | -1.412 | 0.377 |
| PonA1 | 0.877 | 0.264 |
| EccD1_KO | -0.687 | -1.644 |
| EspI_KO | -0.733 | 0.468 |
| PE35_KO | 0.184 | 0.347 |
| PPE68_KO | 0.493 | -0.246 |
| glycerol2 | -0.535 | -0.611 |
| lignocerate | -2.742 | -0.751 |
| oleate | -6.0 | -1.704 |
| phosphatidylcholine | -1.717 | -0.496 |
| acetate | 0.442 | 1.327 |
| glucAc | 0.639 | 0.0 |
| Rv0950ko | 0.205 | 0.657 |
| Rv1096ko | -0.467 | -0.772 |
| Rv3684ko | -0.314 | -1.395 |
| delta_otsA_trehalose | 0.062 | -0.103 |