Top 10 genes with highest correlation to Rv2901c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1348/irtA | (cc=0.5873) | info on Rv1348/irtA |
| Rv0418/lpqL | (cc=0.5732) | info on Rv0418/lpqL |
| Rv1592c/- | (cc=0.5682) | info on Rv1592c/- |
| Rv3574/kstR | (cc=0.5482) | info on Rv3574/kstR |
| Rv0406c/- | (cc=0.5421) | info on Rv0406c/- |
| Rv2795c/- | (cc=0.5393) | info on Rv2795c/- |
| Rv2782c/pepR | (cc=0.534) | info on Rv2782c/pepR |
| Rv2239c/- | (cc=0.5327) | info on Rv2239c/- |
| Rv3412/- | (cc=0.5325) | info on Rv3412/- |
| Rv2564/glnQ | (cc=0.5188) | info on Rv2564/glnQ |
Correlation of Rv2901c/- with Rv2564/glnQ
Normalized LFCs for Rv2901c/-:
(description and provenance of datasets)
| Rv2901c/- | Rv2564/glnQ | |
| Fe_supp_jason_reseq | 0.36 | 2.013 |
| low_pH_jason_reseq | 0.837 | -0.333 |
| NO_jason_reseq | -0.958 | -1.853 |
| B6_jason_reseq | -0.365 | -1.519 |
| MHCII_jason_reseq | 0.394 | -0.932 |
| Isoniazid02 | -0.272 | 0.036 |
| Rifampicin4 | -1.186 | -2.134 |
| Ethambutol3 | -0.795 | 1.918 |
| Meropenem3 | 1.353 | 0.649 |
| Vancomycin16 | -0.496 | -0.578 |
| Rv2680_day32 | -2.508 | -2.923 |
| H37Rv_KO_MarP | -1.937 | 0.621 |
| hypoxia_3wks | -2.253 | -3.038 |
| hypoxia_6wks | -0.689 | -2.011 |
| glycerol | -1.668 | 0.676 |
| cholesterol | -0.2 | 0.44 |
| AJ | -1.047 | -3.514 |
| Bibs02 | 0.461 | -2.262 |
| Bibs02c | -0.776 | 0.652 |
| BL6 | -1.492 | -2.64 |
| BL6a | -1.636 | -1.086 |
| BXD01 | -1.189 | -3.107 |
| BXD010 | -1.186 | -1.829 |
| BXD011 | -2.006 | -2.911 |
| BXD03 | -1.2 | -1.721 |
| BXD04 | -1.495 | -2.264 |
| BXD05 | -1.651 | -3.076 |
| BXD06 | -1.709 | -2.714 |
| BXD07 | -1.161 | -2.716 |
| BXD08 | -2.127 | -2.704 |
| BXD09 | -1.435 | -3.352 |
| CAST | -1.238 | -0.429 |
| CCcont | -0.066 | 0.355 |
| DS01 | -0.652 | 2.322 |
| DS02 | -0.725 | 0.607 |
| DS04 | 0.082 | 2.805 |
| DS0c | 0.058 | 1.673 |
| GP01 | -2.114 | -2.355 |
| GP02 | -1.567 | -1.985 |
| GP0c | -1.955 | -3.102 |
| NOD | 0.818 | 0.552 |
| NZO | -2.446 | -2.766 |
| PWK | -1.62 | 1.212 |
| H37Rv_KO_CtpC | -1.422 | -0.95 |
| H37Rv_KO_CtpD | 0.84 | -0.764 |
| H37Rv_KO_Rv1272 | -0.992 | -1.846 |
| H37Rv_KO_SugABC | -1.866 | -1.5 |
| H37Rv_KO_MbtN | -2.207 | -1.952 |
| Trans05 | -0.691 | -2.986 |
| macrophage_unactivated | -0.164 | 0.947 |
| IL1 | 0.122 | -1.818 |
| Rapamycin | 0.807 | -0.543 |
| Tcell | 0.261 | 0.0 |
| GMCSF | -1.133 | 0.671 |
| IFNab | -1.557 | 0.163 |
| IFNg | -1.494 | -1.013 |
| IFNg_GMCSF1 | -1.618 | -0.179 |
| Rv1432_day32 | -2.562 | -3.206 |
| Rv1565c_day32 | -0.599 | -0.509 |
| secA2_input | -0.551 | -1.198 |
| delta_Rv3594 | -2.729 | -2.272 |
| delta_Rv3717 | -3.844 | -1.869 |
| delta_Rv3811 | -2.913 | -1.817 |
| delta_Rv0954 | -1.412 | 1.292 |
| PonA1 | 0.877 | 2.505 |
| EccD1_KO | -0.687 | 0.0 |
| EspI_KO | -0.733 | -0.274 |
| PE35_KO | 0.184 | 1.126 |
| PPE68_KO | 0.493 | 0.816 |
| glycerol2 | -0.535 | -1.572 |
| lignocerate | -2.742 | -0.049 |
| oleate | -6.0 | -2.139 |
| phosphatidylcholine | -1.717 | -0.874 |
| acetate | 0.442 | 1.119 |
| glucAc | 0.639 | 0.357 |
| Rv0950ko | 0.205 | 1.414 |
| Rv1096ko | -0.467 | 0.549 |
| Rv3684ko | -0.314 | 0.088 |
| delta_otsA_trehalose | 0.062 | 1.289 |