Top 10 genes with highest correlation to Rv2901c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1348/irtA | (cc=0.5873) | info on Rv1348/irtA |
| Rv0418/lpqL | (cc=0.5732) | info on Rv0418/lpqL |
| Rv1592c/- | (cc=0.5682) | info on Rv1592c/- |
| Rv3574/kstR | (cc=0.5482) | info on Rv3574/kstR |
| Rv0406c/- | (cc=0.5421) | info on Rv0406c/- |
| Rv2795c/- | (cc=0.5393) | info on Rv2795c/- |
| Rv2782c/pepR | (cc=0.534) | info on Rv2782c/pepR |
| Rv2239c/- | (cc=0.5327) | info on Rv2239c/- |
| Rv3412/- | (cc=0.5325) | info on Rv3412/- |
| Rv2564/glnQ | (cc=0.5188) | info on Rv2564/glnQ |
Correlation of Rv2901c/- with Rv2782c/pepR
Normalized LFCs for Rv2901c/-:
(description and provenance of datasets)
| Rv2901c/- | Rv2782c/pepR | |
| Fe_supp_jason_reseq | 0.36 | 1.5 |
| low_pH_jason_reseq | 0.837 | 0.39 |
| NO_jason_reseq | -0.958 | -0.549 |
| B6_jason_reseq | -0.365 | 0.514 |
| MHCII_jason_reseq | 0.394 | 0.337 |
| Isoniazid02 | -0.272 | 0.348 |
| Rifampicin4 | -1.186 | 1.584 |
| Ethambutol3 | -0.795 | -0.035 |
| Meropenem3 | 1.353 | 2.27 |
| Vancomycin16 | -0.496 | 0.883 |
| Rv2680_day32 | -2.508 | 0.997 |
| H37Rv_KO_MarP | -1.937 | -1.089 |
| hypoxia_3wks | -2.253 | -2.408 |
| hypoxia_6wks | -0.689 | -1.693 |
| glycerol | -1.668 | -0.546 |
| cholesterol | -0.2 | -0.972 |
| AJ | -1.047 | -0.442 |
| Bibs02 | 0.461 | -0.629 |
| Bibs02c | -0.776 | 0.671 |
| BL6 | -1.492 | 0.865 |
| BL6a | -1.636 | 0.304 |
| BXD01 | -1.189 | 0.364 |
| BXD010 | -1.186 | 0.454 |
| BXD011 | -2.006 | -0.161 |
| BXD03 | -1.2 | 0.722 |
| BXD04 | -1.495 | -0.07 |
| BXD05 | -1.651 | 0.503 |
| BXD06 | -1.709 | 0.316 |
| BXD07 | -1.161 | 0.49 |
| BXD08 | -2.127 | 0.128 |
| BXD09 | -1.435 | 0.248 |
| CAST | -1.238 | 0.062 |
| CCcont | -0.066 | 0.428 |
| DS01 | -0.652 | 0.147 |
| DS02 | -0.725 | 0.854 |
| DS04 | 0.082 | -0.594 |
| DS0c | 0.058 | -1.455 |
| GP01 | -2.114 | -1.525 |
| GP02 | -1.567 | -0.544 |
| GP0c | -1.955 | -1.493 |
| NOD | 0.818 | -0.332 |
| NZO | -2.446 | 0.053 |
| PWK | -1.62 | 0.205 |
| H37Rv_KO_CtpC | -1.422 | -0.172 |
| H37Rv_KO_CtpD | 0.84 | 0.648 |
| H37Rv_KO_Rv1272 | -0.992 | -0.805 |
| H37Rv_KO_SugABC | -1.866 | -0.505 |
| H37Rv_KO_MbtN | -2.207 | -1.475 |
| Trans05 | -0.691 | -0.81 |
| macrophage_unactivated | -0.164 | -0.966 |
| IL1 | 0.122 | 0.128 |
| Rapamycin | 0.807 | -0.39 |
| Tcell | 0.261 | 0.072 |
| GMCSF | -1.133 | -1.146 |
| IFNab | -1.557 | -2.373 |
| IFNg | -1.494 | -1.622 |
| IFNg_GMCSF1 | -1.618 | -1.804 |
| Rv1432_day32 | -2.562 | -0.15 |
| Rv1565c_day32 | -0.599 | -0.425 |
| secA2_input | -0.551 | -1.34 |
| delta_Rv3594 | -2.729 | -1.869 |
| delta_Rv3717 | -3.844 | -3.01 |
| delta_Rv3811 | -2.913 | -2.162 |
| delta_Rv0954 | -1.412 | -0.376 |
| PonA1 | 0.877 | 0.279 |
| EccD1_KO | -0.687 | 0.056 |
| EspI_KO | -0.733 | -0.87 |
| PE35_KO | 0.184 | 1.135 |
| PPE68_KO | 0.493 | 0.368 |
| glycerol2 | -0.535 | -0.566 |
| lignocerate | -2.742 | -1.579 |
| oleate | -6.0 | -3.088 |
| phosphatidylcholine | -1.717 | -0.695 |
| acetate | 0.442 | 0.081 |
| glucAc | 0.639 | 0.18 |
| Rv0950ko | 0.205 | -0.757 |
| Rv1096ko | -0.467 | -0.437 |
| Rv3684ko | -0.314 | 0.478 |
| delta_otsA_trehalose | 0.062 | 0.179 |