Top 10 genes with highest correlation to Rv2901c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1348/irtA | (cc=0.5873) | info on Rv1348/irtA |
| Rv0418/lpqL | (cc=0.5732) | info on Rv0418/lpqL |
| Rv1592c/- | (cc=0.5682) | info on Rv1592c/- |
| Rv3574/kstR | (cc=0.5482) | info on Rv3574/kstR |
| Rv0406c/- | (cc=0.5421) | info on Rv0406c/- |
| Rv2795c/- | (cc=0.5393) | info on Rv2795c/- |
| Rv2782c/pepR | (cc=0.534) | info on Rv2782c/pepR |
| Rv2239c/- | (cc=0.5327) | info on Rv2239c/- |
| Rv3412/- | (cc=0.5325) | info on Rv3412/- |
| Rv2564/glnQ | (cc=0.5188) | info on Rv2564/glnQ |
Correlation of Rv2901c/- with Rv1348/irtA
Normalized LFCs for Rv2901c/-:
(description and provenance of datasets)
| Rv2901c/- | Rv1348/irtA | |
| Fe_supp_jason_reseq | 0.36 | 2.452 |
| low_pH_jason_reseq | 0.837 | 1.233 |
| NO_jason_reseq | -0.958 | -0.845 |
| B6_jason_reseq | -0.365 | -0.496 |
| MHCII_jason_reseq | 0.394 | -0.572 |
| Isoniazid02 | -0.272 | 0.156 |
| Rifampicin4 | -1.186 | 0.0 |
| Ethambutol3 | -0.795 | 0.0 |
| Meropenem3 | 1.353 | -0.138 |
| Vancomycin16 | -0.496 | -0.305 |
| Rv2680_day32 | -2.508 | -0.908 |
| H37Rv_KO_MarP | -1.937 | -1.123 |
| hypoxia_3wks | -2.253 | -0.502 |
| hypoxia_6wks | -0.689 | 0.0 |
| glycerol | -1.668 | -1.153 |
| cholesterol | -0.2 | -0.972 |
| AJ | -1.047 | -1.556 |
| Bibs02 | 0.461 | 0.446 |
| Bibs02c | -0.776 | -0.243 |
| BL6 | -1.492 | -0.839 |
| BL6a | -1.636 | -0.356 |
| BXD01 | -1.189 | -0.744 |
| BXD010 | -1.186 | -0.859 |
| BXD011 | -2.006 | -0.612 |
| BXD03 | -1.2 | -0.772 |
| BXD04 | -1.495 | -0.49 |
| BXD05 | -1.651 | -0.903 |
| BXD06 | -1.709 | -0.762 |
| BXD07 | -1.161 | -0.79 |
| BXD08 | -2.127 | -0.892 |
| BXD09 | -1.435 | -0.943 |
| CAST | -1.238 | -1.106 |
| CCcont | -0.066 | 0.49 |
| DS01 | -0.652 | 0.0 |
| DS02 | -0.725 | 0.435 |
| DS04 | 0.082 | -1.107 |
| DS0c | 0.058 | 0.53 |
| GP01 | -2.114 | -0.662 |
| GP02 | -1.567 | -0.558 |
| GP0c | -1.955 | -0.872 |
| NOD | 0.818 | -0.89 |
| NZO | -2.446 | -1.338 |
| PWK | -1.62 | -1.316 |
| H37Rv_KO_CtpC | -1.422 | -0.292 |
| H37Rv_KO_CtpD | 0.84 | -0.502 |
| H37Rv_KO_Rv1272 | -0.992 | -0.805 |
| H37Rv_KO_SugABC | -1.866 | -0.565 |
| H37Rv_KO_MbtN | -2.207 | -0.495 |
| Trans05 | -0.691 | -0.746 |
| macrophage_unactivated | -0.164 | -1.016 |
| IL1 | 0.122 | -0.297 |
| Rapamycin | 0.807 | -0.307 |
| Tcell | 0.261 | 0.0 |
| GMCSF | -1.133 | -1.545 |
| IFNab | -1.557 | -0.973 |
| IFNg | -1.494 | -1.195 |
| IFNg_GMCSF1 | -1.618 | -1.405 |
| Rv1432_day32 | -2.562 | -0.884 |
| Rv1565c_day32 | -0.599 | -0.351 |
| secA2_input | -0.551 | 0.0 |
| delta_Rv3594 | -2.729 | -0.967 |
| delta_Rv3717 | -3.844 | -1.881 |
| delta_Rv3811 | -2.913 | -1.557 |
| delta_Rv0954 | -1.412 | 0.226 |
| PonA1 | 0.877 | 0.621 |
| EccD1_KO | -0.687 | 0.474 |
| EspI_KO | -0.733 | 0.0 |
| PE35_KO | 0.184 | 1.779 |
| PPE68_KO | 0.493 | 0.883 |
| glycerol2 | -0.535 | -0.509 |
| lignocerate | -2.742 | -0.865 |
| oleate | -6.0 | -1.202 |
| phosphatidylcholine | -1.717 | -0.657 |
| acetate | 0.442 | 0.0 |
| glucAc | 0.639 | -0.176 |
| Rv0950ko | 0.205 | 0.609 |
| Rv1096ko | -0.467 | 0.416 |
| Rv3684ko | -0.314 | 0.452 |
| delta_otsA_trehalose | 0.062 | 0.294 |