Top 10 genes with highest correlation to Rv2865/relF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2558/- | (cc=0.5537) | info on Rv2558/- |
| Rv1996/- | (cc=0.5506) | info on Rv1996/- |
| Rv0049/- | (cc=0.5364) | info on Rv0049/- |
| Rv2345/- | (cc=0.5184) | info on Rv2345/- |
| Rv0150c/- | (cc=0.4979) | info on Rv0150c/- |
| Rv2885c/- | (cc=0.4951) | info on Rv2885c/- |
| Rv2966c/- | (cc=0.488) | info on Rv2966c/- |
| Rv2231c/cobC | (cc=0.4877) | info on Rv2231c/cobC |
| Rv0866/moaE2 | (cc=0.4664) | info on Rv0866/moaE2 |
| Rv1857/modA | (cc=0.4656) | info on Rv1857/modA |
Correlation of Rv2865/relF with Rv2231c/cobC
Normalized LFCs for Rv2865/relF:
(description and provenance of datasets)
| Rv2865/relF | Rv2231c/cobC | |
| Fe_supp_jason_reseq | 0.036 | -0.463 |
| low_pH_jason_reseq | -0.353 | -0.1 |
| NO_jason_reseq | 0.641 | -0.079 |
| B6_jason_reseq | -0.052 | -1.435 |
| MHCII_jason_reseq | -0.012 | -0.893 |
| Isoniazid02 | -3.936 | -0.581 |
| Rifampicin4 | 0.56 | 0.133 |
| Ethambutol3 | -3.694 | -0.158 |
| Meropenem3 | -3.71 | -0.363 |
| Vancomycin16 | -1.157 | -0.568 |
| Rv2680_day32 | 1.134 | 0.811 |
| H37Rv_KO_MarP | 0.697 | -1.507 |
| hypoxia_3wks | 0.14 | 0.467 |
| hypoxia_6wks | 0.347 | 1.205 |
| glycerol | -1.521 | 0.162 |
| cholesterol | -1.07 | -0.264 |
| AJ | -1.714 | -0.424 |
| Bibs02 | -2.649 | 0.946 |
| Bibs02c | -0.477 | -0.182 |
| BL6 | 1.273 | 0.477 |
| BL6a | 0.948 | 1.122 |
| BXD01 | -0.442 | 1.214 |
| BXD010 | 1.873 | 0.629 |
| BXD011 | 1.22 | 1.498 |
| BXD03 | 0.245 | 1.088 |
| BXD04 | 0.842 | 2.739 |
| BXD05 | 1.027 | 1.863 |
| BXD06 | 0.201 | 1.947 |
| BXD07 | 0.843 | 1.383 |
| BXD08 | -0.048 | 2.292 |
| BXD09 | 1.067 | 1.614 |
| CAST | -0.185 | -0.791 |
| CCcont | 0.633 | 1.202 |
| DS01 | -0.645 | 0.0 |
| DS02 | -1.801 | -0.189 |
| DS04 | -1.97 | -0.453 |
| DS0c | -0.11 | 1.383 |
| GP01 | -0.065 | 0.0 |
| GP02 | -1.016 | -0.286 |
| GP0c | 0.332 | -0.113 |
| NOD | 1.91 | -0.905 |
| NZO | -0.146 | 1.225 |
| PWK | -0.571 | -0.171 |
| H37Rv_KO_CtpC | 0.285 | 0.571 |
| H37Rv_KO_CtpD | 0.33 | -0.591 |
| H37Rv_KO_Rv1272 | 0.288 | 1.338 |
| H37Rv_KO_SugABC | 1.604 | 0.586 |
| H37Rv_KO_MbtN | 1.113 | 1.226 |
| Trans05 | 0.942 | 1.536 |
| macrophage_unactivated | -1.335 | 1.922 |
| IL1 | 0.756 | 1.139 |
| Rapamycin | -0.114 | 1.669 |
| Tcell | 0.274 | 1.189 |
| GMCSF | 0.084 | 1.014 |
| IFNab | -0.544 | 0.683 |
| IFNg | 0.823 | 0.82 |
| IFNg_GMCSF1 | 0.374 | 1.546 |
| Rv1432_day32 | -0.164 | -0.618 |
| Rv1565c_day32 | 0.0 | -1.989 |
| secA2_input | 0.163 | -0.62 |
| delta_Rv3594 | 4.483 | 2.709 |
| delta_Rv3717 | 4.268 | 2.718 |
| delta_Rv3811 | 4.653 | 2.314 |
| delta_Rv0954 | 4.184 | 1.773 |
| PonA1 | 3.704 | 1.506 |
| EccD1_KO | 1.506 | 0.201 |
| EspI_KO | 0.445 | -0.787 |
| PE35_KO | 0.604 | 0.265 |
| PPE68_KO | -0.39 | 0.099 |
| glycerol2 | -0.909 | 0.0 |
| lignocerate | -0.47 | 0.082 |
| oleate | -0.756 | 0.539 |
| phosphatidylcholine | -0.65 | 0.213 |
| acetate | 0.063 | -0.283 |
| glucAc | -1.127 | -0.405 |
| Rv0950ko | -1.058 | 0.395 |
| Rv1096ko | -1.52 | 0.202 |
| Rv3684ko | -1.831 | 0.0 |
| delta_otsA_trehalose | 1.719 | 0.58 |