Top 10 genes with highest correlation to Rv2865/relF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2558/- | (cc=0.5537) | info on Rv2558/- |
| Rv1996/- | (cc=0.5506) | info on Rv1996/- |
| Rv0049/- | (cc=0.5364) | info on Rv0049/- |
| Rv2345/- | (cc=0.5184) | info on Rv2345/- |
| Rv0150c/- | (cc=0.4979) | info on Rv0150c/- |
| Rv2885c/- | (cc=0.4951) | info on Rv2885c/- |
| Rv2966c/- | (cc=0.488) | info on Rv2966c/- |
| Rv2231c/cobC | (cc=0.4877) | info on Rv2231c/cobC |
| Rv0866/moaE2 | (cc=0.4664) | info on Rv0866/moaE2 |
| Rv1857/modA | (cc=0.4656) | info on Rv1857/modA |
Correlation of Rv2865/relF with Rv0866/moaE2
Normalized LFCs for Rv2865/relF:
(description and provenance of datasets)
| Rv2865/relF | Rv0866/moaE2 | |
| Fe_supp_jason_reseq | 0.036 | -0.302 |
| low_pH_jason_reseq | -0.353 | -1.447 |
| NO_jason_reseq | 0.641 | -1.462 |
| B6_jason_reseq | -0.052 | -0.142 |
| MHCII_jason_reseq | -0.012 | 0.486 |
| Isoniazid02 | -3.936 | -0.124 |
| Rifampicin4 | 0.56 | -1.013 |
| Ethambutol3 | -3.694 | -0.392 |
| Meropenem3 | -3.71 | -0.763 |
| Vancomycin16 | -1.157 | -0.225 |
| Rv2680_day32 | 1.134 | 0.806 |
| H37Rv_KO_MarP | 0.697 | 1.566 |
| hypoxia_3wks | 0.14 | 0.299 |
| hypoxia_6wks | 0.347 | 0.345 |
| glycerol | -1.521 | 0.237 |
| cholesterol | -1.07 | -1.043 |
| AJ | -1.714 | 0.398 |
| Bibs02 | -2.649 | 0.578 |
| Bibs02c | -0.477 | -0.828 |
| BL6 | 1.273 | 0.702 |
| BL6a | 0.948 | -0.136 |
| BXD01 | -0.442 | 0.975 |
| BXD010 | 1.873 | 0.171 |
| BXD011 | 1.22 | -0.392 |
| BXD03 | 0.245 | 0.734 |
| BXD04 | 0.842 | 0.822 |
| BXD05 | 1.027 | 0.58 |
| BXD06 | 0.201 | 0.125 |
| BXD07 | 0.843 | 0.581 |
| BXD08 | -0.048 | 0.753 |
| BXD09 | 1.067 | 0.369 |
| CAST | -0.185 | -1.72 |
| CCcont | 0.633 | 0.798 |
| DS01 | -0.645 | -0.799 |
| DS02 | -1.801 | 0.076 |
| DS04 | -1.97 | -0.951 |
| DS0c | -0.11 | -0.244 |
| GP01 | -0.065 | -2.09 |
| GP02 | -1.016 | -2.337 |
| GP0c | 0.332 | -0.583 |
| NOD | 1.91 | -2.078 |
| NZO | -0.146 | 0.026 |
| PWK | -0.571 | 1.006 |
| H37Rv_KO_CtpC | 0.285 | -2.13 |
| H37Rv_KO_CtpD | 0.33 | 0.189 |
| H37Rv_KO_Rv1272 | 0.288 | -0.208 |
| H37Rv_KO_SugABC | 1.604 | -1.017 |
| H37Rv_KO_MbtN | 1.113 | 0.462 |
| Trans05 | 0.942 | 1.154 |
| macrophage_unactivated | -1.335 | 1.253 |
| IL1 | 0.756 | 0.4 |
| Rapamycin | -0.114 | 0.23 |
| Tcell | 0.274 | 1.31 |
| GMCSF | 0.084 | -0.356 |
| IFNab | -0.544 | 1.215 |
| IFNg | 0.823 | 0.152 |
| IFNg_GMCSF1 | 0.374 | 0.795 |
| Rv1432_day32 | -0.164 | -0.933 |
| Rv1565c_day32 | 0.0 | -1.709 |
| secA2_input | 0.163 | 1.01 |
| delta_Rv3594 | 4.483 | 3.832 |
| delta_Rv3717 | 4.268 | 2.04 |
| delta_Rv3811 | 4.653 | 3.297 |
| delta_Rv0954 | 4.184 | 1.764 |
| PonA1 | 3.704 | 0.833 |
| EccD1_KO | 1.506 | -0.559 |
| EspI_KO | 0.445 | 1.771 |
| PE35_KO | 0.604 | -0.723 |
| PPE68_KO | -0.39 | 0.838 |
| glycerol2 | -0.909 | -0.912 |
| lignocerate | -0.47 | -0.298 |
| oleate | -0.756 | -1.989 |
| phosphatidylcholine | -0.65 | -1.052 |
| acetate | 0.063 | -0.874 |
| glucAc | -1.127 | -0.688 |
| Rv0950ko | -1.058 | -0.645 |
| Rv1096ko | -1.52 | -1.303 |
| Rv3684ko | -1.831 | -1.562 |
| delta_otsA_trehalose | 1.719 | 0.079 |